RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-221ENST00000520265 NDUFAF5Q5TEU4 345 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 IL20RBQ6UXL0 311 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 METTL4Q8N3J2 472 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-221ENST00000520265 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 OR5L2Q8NGL0 311 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 RDH11Q8TC12 318 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 AENQ8WTP8 325 aaKnown RBP13.18□□□□□ -0.3
VEGFA-221ENST00000520265 NR4A3Q92570 626 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 RIT1Q92963 219 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 UCN3Q969E3 161 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 APOPT1Q96IL0 206 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 SMC6Q96SB8 1091 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 GSTO2Q9H4Y5 243 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.39e-10■■□□□ 11.8
VEGFA-221ENST00000520265 PSD3Q9NYI0 1048 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 VPS29Q9UBQ0 182 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 ZNF223Q9UK11 482 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-221ENST00000520265 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 ERVK-19Q9WJR5 959 aa13.18□□□□□ -0.3
VEGFA-221ENST00000520265 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
VEGFA-221ENST00000520265 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 PGRMC2O15173 223 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 PCDH7O60245 1069 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 SEMA7AO75326 666 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 NEURL1O76050 574 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 DDAH2O95865 285 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 NUDT17P0C025 328 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 CHN1P15882 459 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 RFC3P40938 356 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 GPR85P60893 370 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 RNF4P78317 190 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 RBPJQ06330 500 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 ACSM2AQ08AH3 577 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 CSTF3Q12996 717 aaKnown RBP13.17□□□□□ -0.3
VEGFA-221ENST00000520265 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 ACSM2BQ68CK6 577 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 MRM1Q6IN84 353 aaKnown RBP13.17□□□□□ -0.3
VEGFA-221ENST00000520265 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 RNF111Q6ZNA4 994 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 SLC29A4Q7RTT9 530 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-221ENST00000520265 OR4K14Q8NGD5 310 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 AGAP11Q8TF27 550 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 CAVIN3Q969G5 261 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 KLHL29Q96CT2 875 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 SENP5Q96HI0 755 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-221ENST00000520265 FAM111AQ96PZ2 611 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 FAIM2Q9BWQ8 316 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 EBPLQ9BY08 206 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 PARD6BQ9BYG5 372 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 TIMMDC1Q9NPL8 285 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 MYOTQ9UBF9 498 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 ZNF225Q9UK10 706 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 ADAM29Q9UKF5 820 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 NPIPA1Q9UND3 350 aa13.17□□□□□ -0.3
VEGFA-221ENST00000520265 KLF13Q9Y2Y9 288 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-221ENST00000520265 UBR5O95071 2799 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-221ENST00000520265 SVILO95425 2214 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 A1L4Q6 167 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 GOLGA6L10A6NI86 522 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 HRKO00198 91 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 TFECO14948 347 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-221ENST00000520265 HSD3B1P14060 373 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 ZNF24P17028 368 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 HSD3B2P26439 372 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 MEOX1P50221 254 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 HK2P52789 917 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 PLGLB1Q02325 96 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-221ENST00000520265 ASPHQ12797 758 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 BIKQ13323 160 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 LIPMQ5VYY2 423 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 HLA-DQA1Q5Y7H0 255 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 DGAT2L6Q6ZPD8 337 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 FRMD7Q6ZUT3 714 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 MMP21Q8N119 569 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
VEGFA-221ENST00000520265 GBP7Q8N8V2 638 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-221ENST00000520265 DNAJB8Q8NHS0 232 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 SSC4DQ8WTU2 575 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 SCMH1Q96GD3 660 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 MAGED4Q96JG8 741 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 RASL10BQ96S79 203 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 SLX1AQ9BQ83 275 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 ACPTQ9BZG2 426 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 BRINP2Q9C0B6 783 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 SLC5A6Q9Y289 635 aa13.16□□□□□ -0.3
VEGFA-221ENST00000520265 PRRC2CQ9Y520 2896 aaKnown RBP13.16□□□□□ -0.3
VEGFA-221ENST00000520265 TRGV8A0A0C4DH27 118 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 A0A1W2PS29 197 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 G3V3Y1 287 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 NME2P1O60361 137 aa13.15□□□□□ -0.3
VEGFA-221ENST00000520265 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.32e-13■■□□□ 11.5
VEGFA-221ENST00000520265 OR6B1O95007 311 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms