RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 TMEM229AB2RXF0 380 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 AQP9O43315 295 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 PRAMEF10O60809 474 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 DCNP07585 359 aaKnown RBP25.45■■□□□ 1.66
COL13A1-212ENST00000520133 FPR1P21462 350 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 CDH3P22223 829 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 FEN1P39748 380 aaKnown RBP25.45■■□□□ 1.66
COL13A1-212ENST00000520133 ZNF438Q7Z4V0 828 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 ARL10Q8N8L6 244 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 SLC38A5Q8WUX1 472 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 CCDC3Q9BQI4 270 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 RUBCNLQ9H714 662 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 PRDM9Q9NQV7 894 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 C3orf18Q9UK00 162 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 DAPP1Q9UN19 280 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 ORC6Q9Y5N6 252 aa25.45■■□□□ 1.66
COL13A1-212ENST00000520133 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 C19orf67A6NJJ6 358 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 K7ESF4 209 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 HMGN4O00479 90 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 PDE9AO76083 593 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 H6PDO95479 791 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 BCHEP06276 602 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 C8orf89P0DMQ9 161 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 PPP1CAP62136 330 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 RFX4Q33E94 735 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 TMEFF1Q8IYR6 380 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 METTL25Q8N6Q8 603 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 OR56A1Q8NGH5 318 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 RMND5BQ96G75 393 aaPredicted RBP25.44■■□□□ 1.66
COL13A1-212ENST00000520133 FBXL20Q96IG2 436 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 IER2Q9BTL4 223 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 GABARAPL1Q9H0R8 117 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 DNAAF2Q9NVR5 837 aaKnown RBP25.44■■□□□ 1.66
COL13A1-212ENST00000520133 VNN3Q9NY84 501 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 KCMF1Q9P0J7 381 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 RAB23Q9ULC3 237 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 TP53BP1Q12888 1972 aaPredicted RBP25.44■■□□□ 1.66
COL13A1-212ENST00000520133 LILRA5A6NI73 299 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 DIRAS1O95057 198 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 TFPTP0C1Z6 253 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 LIM2P55344 173 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 PRR5P85299 388 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 ZIK1Q3SY52 487 aaPredicted RBP25.44■■□□□ 1.66
COL13A1-212ENST00000520133 IQCCQ4KMZ1 466 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 ISLR2Q6UXK2 745 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 ARMC8Q8IUR7 673 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 CSNK1A1LQ8N752 337 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 DNASE2BQ8WZ79 361 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 TMEM19Q96HH6 336 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 SLC38A3Q99624 504 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 MRPS26Q9BYN8 205 aaKnown RBP25.44■■□□□ 1.66
COL13A1-212ENST00000520133 LYRM4Q9HD34 91 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 P2RX2Q9UBL9 471 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 SAMHD1Q9Y3Z3 626 aaKnown RBP25.44■■□□□ 1.66
COL13A1-212ENST00000520133 SPACA6W5XKT8 324 aa25.44■■□□□ 1.66
COL13A1-212ENST00000520133 HS6ST1O60243 411 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 ITGA2P17301 1181 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 MATN1P21941 496 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 BCKDHBP21953 392 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 KHKP50053 298 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 RAD23AP54725 363 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 WDR45BQ5MNZ6 344 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 TTC23Q5W5X9 447 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 USP51Q70EK9 711 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 GEMIN6Q8WXD5 167 aaKnown RBP25.43■■□□□ 1.66
COL13A1-212ENST00000520133 RAB8BQ92930 207 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 ZNF681Q96N22 645 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 ZNF347Q96SE7 839 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 OR51I1Q9H343 314 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 C3orf14Q9HBI5 128 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 TMEM131Q92545 1883 aa25.43■■□□□ 1.66
COL13A1-212ENST00000520133 LMO7DNF2Z398 122 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 FHP07954 510 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 SMIM18P0DKX4 95 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 ST6GAL1P15907 406 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 PRKACGP22612 351 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 C21orf59P57076 290 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 VSX2P58304 361 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-212ENST00000520133 RUNX2Q13950 521 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 ZNF750Q32MQ0 723 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 SLC44A2Q8IWA5 706 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-212ENST00000520133 C19orf47Q8N9M1 422 aaKnown RBP25.42■■□□□ 1.66
COL13A1-212ENST00000520133 ZNF555Q8NEP9 628 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 KLHL6Q8WZ60 621 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 MAGED4Q96JG8 741 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 TOR3AQ9H497 397 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 H3BNH8 94 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 EMC8O43402 210 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 CLPTM1O96005 669 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 CAPZBP47756 277 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 ZC3H12BQ5HYM0 836 aaKnown RBP25.42■■□□□ 1.66
COL13A1-212ENST00000520133 TTC33Q6PID6 262 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-212ENST00000520133 C10orf90Q96M02 699 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 TRAPPC9Q96Q05 1148 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 DUSP15Q9H1R2 295 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-212ENST00000520133 TRPC4Q9UBN4 977 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 PCDHGB3Q9Y5G1 929 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 SLC22A7Q9Y694 548 aa25.42■■□□□ 1.66
COL13A1-212ENST00000520133 DNAH14Q0VDD8 3507 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms