RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 UFM1P61960 85 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 RHAGQ02094 409 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 LRRC74AQ0VAA2 488 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 RCAN2Q14206 197 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 ERV3-1Q14264 604 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 NSDHLQ15738 373 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 UGT8Q16880 541 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 PGS1Q32NB8 556 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 FAM174BQ3ZCQ3 159 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 AGKQ53H12 422 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 ANXA8L1Q5VT79 327 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 RIPOR1Q6ZS17 1223 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 SHISA6Q6ZSJ9 500 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 MSANTD1Q6ZTZ1 278 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 MTDHQ86UE4 582 aaKnown RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 MMP21Q8N119 569 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 LRRC25Q8N386 305 aaPredicted RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 VPS37AQ8NEZ2 397 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 SNIP1Q8TAD8 396 aaKnown RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 KCNE4Q8WWG9 221 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 ZBED6CLQ96FA7 236 aaPredicted RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 DUSP26Q9BV47 211 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 ACTL8Q9H568 366 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 CCDC86Q9H6F5 360 aaKnown RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 AKIRIN1Q9H9L7 192 aaPredicted RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 FAM120CQ9NX05 1096 aaKnown RBP13.28□□□□□ -0.28
SDC2-203ENST00000519587 CCDC167Q9P0B6 97 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 CCDC88CQ9P219 2028 aa13.28□□□□□ -0.28
SDC2-203ENST00000519587 IGKV3D-11A0A0A0MRZ8 115 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 GABRR3A8MPY1 467 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 NR5A2O00482 541 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 CFLARO15519 480 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 FGF17O60258 216 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 LDB3O75112 727 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 ALOX12BO75342 701 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 MAOAP21397 527 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 MPIP34949 423 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 IGLV3-21P80748 117 aaPredicted RBP13.27□□□□□ -0.29
SDC2-203ENST00000519587 KLF10Q13118 480 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 UBAP2LQ14157 1087 aaKnown RBP13.27□□□□□ -0.29
SDC2-203ENST00000519587 SPANXN4Q5MJ08 99 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 RAB43Q86YS6 212 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 TMEM52Q8NDY8 209 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 PLPP5Q8NEB5 264 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 OR7A2PQ8NGA2 310 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 OR8J2Q8NGG1 315 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 OR9I1Q8NGQ6 314 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 TSPEARQ8WU66 669 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 NACC2Q96BF6 587 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 RMND5AQ9H871 391 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 C5AR2Q9P296 337 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.29
SDC2-203ENST00000519587 EXO1Q9UQ84 846 aaKnown RBP13.27□□□□□ -0.29
SDC2-203ENST00000519587 LOC101059948A0A1B0GTJ6 334 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 TCRBV16S1A1N1A0A5B0 115 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 CCDC154A6NI56 674 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 TERTO14746 1132 aaKnown RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 CNOT3O75175 753 aaKnown RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 KLF7O75840 302 aaPredicted RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 SLITRK5O94991 958 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 IFNA16P05015 189 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 PGRP06401 933 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 SLC35E2P0CK97 266 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 CPMP14384 443 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 PORP16435 677 aaPredicted RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 XKP51811 444 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 BTG2P78543 158 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ID2Q02363 134 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 TIGD2Q4W5G0 525 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ANKRD26P1Q6NSI1 321 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 PAOXQ6QHF9 649 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 BLOC1S3Q6QNY0 202 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ST13P4Q8IZP2 240 aaPredicted RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 TSLPQ969D9 159 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ANKRD9Q96BM1 317 aaPredicted RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 COQ8BQ96D53 544 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ERP27Q96DN0 273 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 SPDL1Q96EA4 605 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 TEX37Q96LM6 180 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 IP6K3Q96PC2 410 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 OR52E6Q96RD3 313 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 SLC25A23Q9BV35 468 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ALOXE3Q9BYJ1 711 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 DPH1Q9BZG8 443 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 MYLK2Q9H1R3 596 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 NEUROD4Q9HD90 331 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ADAP2Q9NPF8 381 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 ACSS1Q9NUB1 689 aaPredicted RBP13.26□□□□□ -0.29
SDC2-203ENST00000519587 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
SDC2-203ENST00000519587 BBIP1A8MTZ0 92 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 RNASET2O00584 256 aaKnown RBP13.25□□□□□ -0.29
SDC2-203ENST00000519587 ANGPT2O15123 496 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 RECKO95980 971 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 ATP1B1P05026 303 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 LAMP1P11279 417 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 LIFP15018 202 aa13.25□□□□□ -0.29
SDC2-203ENST00000519587 MMP11P24347 488 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms