RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ZCCHC7Q8N3Z6 543 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 NATD1Q8N6N6 113 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CSNK1A1LQ8N752 337 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 PACRGLQ8N7B6 248 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 OR52N2Q8NGI0 321 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 OR10Q1Q8NGQ4 319 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 OR5AK3PQ8NH89 298 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 NT5CQ8TCD5 201 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 OR5P2Q8WZ92 322 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 POP5Q969H6 163 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 EXOSC8Q96B26 276 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 TM4SF19Q96DZ7 209 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 THAP11Q96EK4 314 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 PYURFQ96I23 114 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 C9orf16Q9BUW7 83 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 MAGIXQ9H6Y5 334 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 PDE7BQ9NP56 450 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 IRAK4Q9NWZ3 460 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 ZNF639Q9UID6 485 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 A0A1W2PR48 441 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 WASHC1A8K0Z3 465 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 DLGAP1O14490 977 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 GDF9O60383 454 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 ETFAP13804 333 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 UQCRC2P22695 453 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CRATP43155 626 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 STXBP1P61764 594 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 SNRPNP63162 240 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 TMTC4Q5T4D3 741 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 TMEM71Q6P5X7 295 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 MARVELD2Q8N4S9 558 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 DNAJC22Q8N4W6 341 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CAMKVQ8NCB2 501 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 SRFBP1Q8NEF9 429 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 MAL2Q969L2 176 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 VPS50Q96JG6 964 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 BDH2Q9BUT1 245 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 TMEM121BQ9BXQ6 578 aaPredicted RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 YY1AP1Q9H869 796 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 RAPGEFL1Q9UHV5 662 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 ATG4BQ9Y4P1 393 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CCDC88CQ9P219 2028 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 DLL1O00548 723 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 LRP3O75074 770 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 DEAF1O75398 565 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 PRKRAO75569 313 aaKnown RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 GCM2O75603 506 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 RASAL1O95294 804 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 ZNF888P0CJ79 500 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 CERS1P27544 350 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 PCGF2P35227 344 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 CHI3L1P36222 383 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 CRYBA2P53672 197 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 MANFP55145 182 aaKnown RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 HSD11B2P80365 405 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 RELAQ04206 551 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 PDK3Q15120 406 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 LRRC23Q53EV4 343 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 ANGPTL8Q6UXH0 198 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 PRSS42Q7Z5A4 293 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 RNF130Q86XS8 419 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 RCBTB1Q8NDN9 531 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 Q9H521 79 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
CLN8-204ENST00000519254 UBAP1Q9NZ09 502 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 UNC13CQ8NB66 2214 aa13.67□□□□□ -0.22
CLN8-204ENST00000519254 PGRMC2O15173 223 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 KRT75O95678 551 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 DDX5P17844 614 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 SOAT1P35610 550 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 FADDQ13158 208 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 GPR19Q15760 415 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 NHSL2Q5HYW2 709 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 TBPL2Q6SJ96 375 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 CARFQ8N187 725 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 C11orf65Q8NCR3 313 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 GAL3ST3Q96A11 431 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 FAIM2Q9BWQ8 316 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 ASPSCR1Q9BZE9 553 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 DNAJB9Q9UBS3 223 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 FAF1Q9UNN5 650 aaPredicted RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 PLCL2Q9UPR0 1127 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SAMD4AQ9UPU9 718 aaKnown RBP13.66□□□□□ -0.22
CLN8-204ENST00000519254 MAP4K5Q9Y4K4 846 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 SNX8Q9Y5X2 465 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 RNF103-CHMP3A0A140T963 221 aa13.66□□□□□ -0.22
CLN8-204ENST00000519254 MAGEA13PA6NCF6 341 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms