RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 PHACTR1Q9C0D0 580 aa12.59□□□□□ -0.39
VDAC3-204ENST00000519072 CAB39LQ9H9S4 337 aa12.59□□□□□ -0.39
VDAC3-204ENST00000519072 ACKR4Q9NPB9 350 aa12.59□□□□□ -0.39
VDAC3-204ENST00000519072 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.59□□□□□ -0.39
VDAC3-204ENST00000519072 QPCTLQ9NXS2 382 aa12.59□□□□□ -0.39
VDAC3-204ENST00000519072 CD274Q9NZQ7 290 aa12.59□□□□□ -0.39
VDAC3-204ENST00000519072 BOKQ9UMX3 212 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-204ENST00000519072 LRRC3CA6NJW4 275 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 SYT5O00445 386 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 DYRK3O43781 588 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 CCNT2O60583 730 aaKnown RBP12.58□□□□□ -0.4
VDAC3-204ENST00000519072 SERPINB1P30740 379 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 SSR2P43308 183 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 KIR2DL3P43628 341 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 PLIN5Q00G26 463 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 HSPB2Q16082 182 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 PRAMEF20Q5VT98 475 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 DGAT2L6Q6ZPD8 337 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 OR4N5Q8IXE1 308 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 ZBED8Q8IZ13 594 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 CMTM7Q96FZ5 175 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 RBM18Q96H35 190 aaKnown RBP12.58□□□□□ -0.4
VDAC3-204ENST00000519072 FBXL20Q96IG2 436 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 UBXN10Q96LJ8 280 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 KRT12Q99456 494 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 GPATCH1Q9BRR8 931 aaKnown RBP12.58□□□□□ -0.4
VDAC3-204ENST00000519072 CD244Q9BZW8 370 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 CLEC4MQ9H2X3 399 aaPredicted RBP12.58□□□□□ -0.4
VDAC3-204ENST00000519072 LIME1Q9H400 295 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 PROK2Q9HC23 129 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 RASSF1Q9NS23 344 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 MS4A12Q9NXJ0 267 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 CNIH4Q9P003 139 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.4
VDAC3-204ENST00000519072 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 HRKO00198 91 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 ZSCAN12O43309 604 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SH3BGRLO75368 114 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 PIAS1O75925 651 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 TGFB1P01137 390 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 S100BP04271 92 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 PCNAP12004 261 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 STMN1P16949 149 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 KLK2P20151 261 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SERPINB3P29508 390 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 UQCRC1P31930 480 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 PPP2R2AP63151 447 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 PCDH1Q08174 1060 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SLAMF1Q13291 335 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SNTB1Q13884 538 aaKnown RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 CEBPEQ15744 281 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 ZKSCAN8Q15776 578 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 FLYWCH1Q4VC44 716 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 DEPDC1Q5TB30 811 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 KHDRBS2Q5VWX1 349 aaKnown RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 OR4C11Q6IEV9 310 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 MED27Q6P2C8 311 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 ST13P4Q8IZP2 240 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 LIX1Q8N485 282 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 RELL2Q8NC24 303 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 OR7G3Q8NG95 312 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 NEIL3Q8TAT5 605 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 TANKQ92844 425 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 PPWD1Q96BP3 646 aaKnown RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 RMND5BQ96G75 393 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 DOCK7Q96N67 2140 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 GPR22Q99680 433 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 RBBP8Q99708 897 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SH3GL2Q99962 352 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 TRIM31Q9BZY9 425 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 SLC6A15Q9H2J7 730 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 RPF2Q9H7B2 306 aaKnown RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 CRIM1Q9NZV1 1036 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 ADGRE2Q9UHX3 823 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 RNF112Q9ULX5 631 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 EDARQ9UNE0 448 aa12.57□□□□□ -0.4
VDAC3-204ENST00000519072 CHCHD2Q9Y6H1 151 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-204ENST00000519072 A6NNC1 897 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 EFCAB8A8MWE9 144 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 CXorf49A8MYA2 514 aaPredicted RBP12.56□□□□□ -0.4
VDAC3-204ENST00000519072 DVL2O14641 736 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 ALOX15P16050 662 aaPredicted RBP12.56□□□□□ -0.4
VDAC3-204ENST00000519072 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
VDAC3-204ENST00000519072 DNASE1P24855 282 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
VDAC3-204ENST00000519072 ASCL1P50553 236 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 TNFRSF17Q02223 184 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 SPRED3Q2MJR0 410 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 FBXL19-AS1Q494R0 122 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 CAPN12Q6ZSI9 719 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 SLC29A4Q7RTT9 530 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 GPR180Q86V85 440 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 CDC20BQ86Y33 519 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 CREG2Q8IUH2 290 aa12.56□□□□□ -0.4
VDAC3-204ENST00000519072 ZCCHC7Q8N3Z6 543 aaKnown RBP12.56□□□□□ -0.4
VDAC3-204ENST00000519072 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms