RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 CLOCKO15516 846 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 B3GALT2O43825 422 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 NR2F6P10588 404 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 FCGR1AP12314 374 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 DDX5P17844 614 aaKnown RBP22.04■■□□□ 1.12
SLIT3-204ENST00000518140 PCGF2P35227 344 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 SPDYE7PQ495Y7 208 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 TNFAIP8L2Q6P589 184 aaPredicted RBP22.04■■□□□ 1.12
SLIT3-204ENST00000518140 ZBTB49Q6ZSB9 765 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 GATAD2AQ86YP4 633 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 ZC3H7AQ8IWR0 971 aaKnown RBP22.04■■□□□ 1.12
SLIT3-204ENST00000518140 OR4N5Q8IXE1 308 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 HORMAD2Q8N7B1 307 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 NFKBIDQ8NI38 313 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 CNBD2Q96M20 576 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 NEUROD4Q9HD90 331 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 WDFY4Q6ZS81 3184 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 PI4KAP42356 2102 aa22.04■■□□□ 1.12
SLIT3-204ENST00000518140 TMEM229AB2RXF0 380 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 UPK1AO00322 258 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 OR6B1O95007 311 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 MED26O95402 600 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 CPN2P22792 545 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 PRIM2P49643 509 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 SIM1P81133 766 aaPredicted RBP22.03■■□□□ 1.12
SLIT3-204ENST00000518140 FADDQ13158 208 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 ARHGEF39Q8N4T4 335 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 CBR4Q8N4T8 237 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 TMEM105Q8N8V8 129 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 PIGKQ92643 395 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 SERHL2Q9H4I8 314 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 GNSP15586 552 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 NTSP30990 170 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 GPC1P35052 558 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 MYBPC1Q00872 1141 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 TNFRSF17Q02223 184 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 CFHR1Q03591 330 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 VAC14Q08AM6 782 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 Q8N9G6 341 aaPredicted RBP22.03■■□□□ 1.12
SLIT3-204ENST00000518140 VPS50Q96JG6 964 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 ROGDIQ9GZN7 287 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 ANKRA2Q9H9E1 313 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 ETAA1Q9NY74 926 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 CSNK1G3Q9Y6M4 447 aa22.03■■□□□ 1.12
SLIT3-204ENST00000518140 SGK494L7N484 410 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 RXRGP48443 463 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 IST1P53990 364 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 TP53BP2Q13625 1128 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 SPIDRQ14159 915 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 GPR19Q15760 415 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 MANEAQ5SRI9 462 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 PPP4R4Q6NUP7 873 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 TBPL2Q6SJ96 375 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 CEACAM20Q6UY09 585 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 ARL10Q8N8L6 244 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 RAB8BQ92930 207 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 TMEM38AQ9H6F2 299 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 PCDHGB5Q9Y5G0 923 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 SCN2AQ99250 2005 aa22.02■■□□□ 1.12
SLIT3-204ENST00000518140 FAM227AF5H4B4 570 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 H0YJX3 145 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 B4GAT1O43505 415 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 GALR3O60755 368 aaPredicted RBP22.02■■□□□ 1.11
SLIT3-204ENST00000518140 SCARB2Q14108 478 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 AMZ1Q400G9 498 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 C6orf52Q5T4I8 152 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 CBLL1Q75N03 491 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 EID3Q8N140 333 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 ZNF655Q8N720 491 aaPredicted RBP22.02■■□□□ 1.11
SLIT3-204ENST00000518140 TMEM52Q8NDY8 209 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 TCTN2Q96GX1 697 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 SAMD4AQ9UPU9 718 aaKnown RBP22.02■■□□□ 1.11
SLIT3-204ENST00000518140 MAGED1Q9Y5V3 778 aaPredicted RBP22.02■■□□□ 1.11
SLIT3-204ENST00000518140 SLC22A7Q9Y694 548 aa22.02■■□□□ 1.11
SLIT3-204ENST00000518140 MYOCOSA0A1B0GUC4 107 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 CSNK2A2P19784 350 aaPredicted RBP22.01■■□□□ 1.11
SLIT3-204ENST00000518140 GABRA4P48169 554 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 CDK6Q00534 326 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 LTB4RQ15722 352 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 TMTC4Q5T4D3 741 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 SZRD1Q7Z422 152 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 OR9A4Q8NGU2 314 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 MAGIXQ9H6Y5 334 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 PHF11Q9UIL8 331 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 ENTPD4Q9Y227 616 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 FRYLO94915 3013 aa22.01■■□□□ 1.11
SLIT3-204ENST00000518140 IGHV1OR21-1A0A087WYE8 117 aa22■■□□□ 1.11
SLIT3-204ENST00000518140 NUDT21O43809 227 aaKnown RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 NME6O75414 186 aaPredicted RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 OPN1SWP03999 348 aa22■■□□□ 1.11
SLIT3-204ENST00000518140 BUD31P41223 144 aaPredicted RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 ARRB1P49407 418 aaPredicted RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 PRKAG1P54619 331 aa22■■□□□ 1.11
SLIT3-204ENST00000518140 DSTNP60981 165 aa22■■□□□ 1.11
SLIT3-204ENST00000518140 PPP1R8Q12972 351 aaKnown RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 ZC3H12BQ5HYM0 836 aaKnown RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 TMEM107Q6UX40 140 aa22■■□□□ 1.11
SLIT3-204ENST00000518140 RBM44Q6ZP01 1051 aaKnown RBP22■■□□□ 1.11
SLIT3-204ENST00000518140 USP53Q70EK8 1073 aa22■■□□□ 1.11
SLIT3-204ENST00000518140 EIF3MQ7L2H7 374 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms