RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C6orf163Q5TEZ5 329 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 FRG2Q64ET8 278 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 TMEM211Q6ICI0 200 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 FAM47EQ6ZV65 393 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 PAGE2Q7Z2X7 111 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 MILR1Q7Z6M3 343 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 IFT20Q8IY31 132 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ST13P4Q8IZP2 240 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 CEP112Q8N8E3 955 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 KIF18AQ8NI77 898 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 NUBPLQ8TB37 319 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 FAM57AQ8TBR7 257 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 WDR20Q8TBZ3 569 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 PHF10Q8WUB8 498 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 RIT1Q92963 219 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ISL2Q96A47 359 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 CDK15Q96Q40 435 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 FRG2BQ96QU4 278 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 NTMT1Q9BV86 223 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 MRPL46Q9H2W6 279 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ASB4Q9Y574 426 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 NOTCH2Q04721 2471 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 EXOC1LA0A1B0GW35 172 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 A0A1W2PR48 441 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 GLOD5A6NK44 160 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 FAM166BA8MTA8 275 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 G3V3Y1 287 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 GUCY1B2O75343 617 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 PRKRAO75569 313 aaKnown RBP12.65□□□□□ -0.38
TCOF1-215ENST00000515516 SEMA3DO95025 777 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 TAC1P20366 129 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 HERVK_113P63132 956 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 ERVK-8P63133 956 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
TCOF1-215ENST00000515516 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 OR52E8Q6IFG1 317 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 MRM1Q6IN84 353 aaKnown RBP12.65□□□□□ -0.38
TCOF1-215ENST00000515516 RNF111Q6ZNA4 994 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 CD163Q86VB7 1156 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 TICAM1Q8IUC6 712 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 MCEMP1Q8IX19 187 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.38
TCOF1-215ENST00000515516 DND1Q8IYX4 353 aaKnown RBP12.65□□□□□ -0.38
TCOF1-215ENST00000515516 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 OR52B6Q8NGF0 335 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 OR52N2Q8NGI0 321 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 CA5BP1Q8WTZ4 195 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 FBXL20Q96IG2 436 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 ERVK-6Q9BXR3 956 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 DEPPQ9NTK1 212 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
TCOF1-215ENST00000515516 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 PCTPQ9UKL6 214 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 ERVK-19Q9WJR5 959 aa12.65□□□□□ -0.38
TCOF1-215ENST00000515516 SVILO95425 2214 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 OR6C76A6NM76 312 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 ENO4A6NNW6 628 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 TMPRSS11DO60235 418 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 AIFM1O95831 613 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 OTCP00480 354 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 GBAP04062 536 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 IGKV3-11P04433 115 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 KLK1P06870 262 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 SNRPB2P08579 225 aaKnown RBP12.64□□□□□ -0.39
TCOF1-215ENST00000515516 SLC35E2P0CK97 266 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 PIK3R1P27986 724 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 GALNSP34059 522 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 PTGER4P35408 488 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 SPRED3Q2MJR0 410 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 CCNYL2Q5T2Q4 361 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 HLA-DQA1Q5Y7H0 255 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 SLC22A10Q63ZE4 541 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 FGD2Q7Z6J4 655 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
TCOF1-215ENST00000515516 C9orf40Q8IXQ3 194 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 TAGAPQ8N103 731 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-215ENST00000515516 DCAKDQ8WVC6 231 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 MTBPQ96DY7 904 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 GAL3ST4Q96RP7 486 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 ZNF717Q9BY31 904 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-215ENST00000515516 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 TP63Q9H3D4 680 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-215ENST00000515516 IL1RL2Q9HB29 575 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 SEMA4BQ9NPR2 832 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-215ENST00000515516 ADAM29Q9UKF5 820 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 SNX6Q9UNH7 406 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 CROCCQ5TZA2 2017 aa12.64□□□□□ -0.39
TCOF1-215ENST00000515516 PINLYPA6NC86 204 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 ABHD2P08910 425 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 SERPINB3P29508 390 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 ECHS1P30084 290 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 GGTA1PQ4G0N0 100 aa12.63□□□□□ -0.39
TCOF1-215ENST00000515516 DGAT2L6Q6ZPD8 337 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms