RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 METTL4Q8N3J2 472 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 C1orf52Q8N6N3 182 aaKnown RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 EIF1ADQ8N9N8 165 aaKnown RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 CCDC63Q8NA47 563 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 MORN4Q8NDC4 146 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 OR14A16Q8NHC5 309 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TANKQ92844 425 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 GSTO2Q9H4Y5 243 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TNFRSF12AQ9NP84 129 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 LYARQ9NX58 379 aaKnown RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 MS4A12Q9NXJ0 267 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 PSD3Q9NYI0 1048 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 MYOTQ9UBF9 498 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TRPS1Q9UHF7 1281 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 SNX6Q9UNH7 406 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 ERVK-11Q9UQG0 969 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 ERVK-19Q9WJR5 959 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 SLC5A6Q9Y289 635 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 NOTCH2Q04721 2471 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 PCNX1Q96RV3 2341 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 TRGV8A0A0C4DH27 118 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 A0A0G2JMM0 328 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 A0A1W2PPB8 328 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 A0A1W2PRS3 328 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 PINLYPA6NC86 204 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 KIR3DP1A8MWS1 328 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 COPEO14579 308 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 PEX1O43933 1283 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 NME2P1O60361 137 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 PLIN3O60664 434 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 SPAG7O75391 227 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 PDE9AO76083 593 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 SLU7O95391 586 aaKnown RBP10.66□□□□□ -0.7
VCAN-212ENST00000515397 LDLRP01130 860 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 CRYABP02511 175 aaKnown RBP10.66□□□□□ -0.7
VCAN-212ENST00000515397 GSTA1P08263 222 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 CT62P0C5K7 136 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 NME2P22392 152 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 HMOX2P30519 316 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 FEN1P39748 380 aaKnown RBP10.66□□□□□ -0.7
VCAN-212ENST00000515397 MEOX1P50221 254 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 MAPK12P53778 367 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 IGLV3-21P80748 117 aaPredicted RBP10.66□□□□□ -0.7
VCAN-212ENST00000515397 ALDH6A1Q02252 535 aaKnown RBP10.66□□□□□ -0.7
VCAN-212ENST00000515397 ERCC6LQ2NKX8 1250 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 GGTA1PQ4G0N0 100 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 NDUFAF5Q5TEU4 345 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 ZYG11AQ6WRX3 759 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 TDRPQ86YL5 185 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 SLC22A9Q8IVM8 553 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 C9orf40Q8IXQ3 194 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 LGI4Q8N135 537 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 HORMAD2Q8N7B1 307 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 TMEM178AQ8NBL3 297 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 DNAJB8Q8NHS0 232 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 ASB15Q8WXK1 588 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 TMEM125Q96AQ2 219 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 TM4SF18Q96CE8 201 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 FRMD6Q96NE9 622 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 RASL10BQ96S79 203 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 ZNF382Q96SR6 550 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 MID1IP1Q9NPA3 183 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 DEPPQ9NTK1 212 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 AHSPQ9NZD4 102 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 YARS2Q9Y2Z4 477 aaKnown RBP10.66□□□□□ -0.7
VCAN-212ENST00000515397 DOPEY1Q5JWR5 2465 aa10.66□□□□□ -0.7
VCAN-212ENST00000515397 CENPEQ02224 2701 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 A8MVJ9 347 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ZNF500O60304 480 aaPredicted RBP10.65□□□□□ -0.7
VCAN-212ENST00000515397 ZG16O60844 167 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 GLRA3O75311 464 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ULK1O75385 1050 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ERAL1O75616 437 aaKnown RBP10.65□□□□□ -0.7
VCAN-212ENST00000515397 SEMA3DO95025 777 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 IGKV3-11P04433 115 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 COX7A2P14406 83 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 CPA3P15088 417 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 CREB1P16220 341 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 SSTR4P31391 388 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 CCT5P48643 541 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ALDH9A1P49189 494 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 XKP51811 444 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 PLIN5Q00G26 463 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 DUSP2Q05923 314 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 RASA2Q15283 850 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 INAQ16352 499 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ST13P4Q8IZP2 240 aaPredicted RBP10.65□□□□□ -0.7
VCAN-212ENST00000515397 ARMC10Q8N2F6 343 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 SIMC1Q8NDZ2 872 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ADCY4Q8NFM4 1077 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 CHTF18Q8WVB6 975 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 RIT1Q92963 219 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 L3HYPDHQ96EM0 354 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 APIPQ96GX9 242 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 GAL3ST4Q96RP7 486 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 EBPLQ9BY08 206 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 ACPTQ9BZG2 426 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 TRIM45Q9H8W5 580 aaPredicted RBP10.65□□□□□ -0.7
VCAN-212ENST00000515397 WDR41Q9HAD4 459 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 HPF1Q9NWY4 346 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms