RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 DLL4Q9NR61 685 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ZNF275Q9NSD4 429 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 DNAJC27Q9NZQ0 273 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 HCN3Q9P1Z3 774 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 NPTNQ9Y639 398 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 IGLV3-10A0A075B6K4 115 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 SLC22A23A1A5C7 686 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 GCM2O75603 506 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 CFDP00746 253 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 GASTP01350 101 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 POU2F1P14859 743 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 POU1F1P28069 291 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 LCN1P31025 176 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 DCDC1P59894 354 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 RPS25P62851 125 aaKnown RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ATAT1Q5SQI0 421 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 RGS7BPQ6MZT1 257 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 CERS6Q6ZMG9 384 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 CHMP1BQ7LBR1 199 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 C11orf96Q7Z7L8 435 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 OR8K3Q8NH51 312 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ADAMTS14Q8WXS8 1223 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 TMEM203Q969S6 136 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 MTFMTQ96DP5 389 aaKnown RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 MYO19Q96H55 970 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 SLC38A2Q96QD8 506 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ABCG5Q9H222 651 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 MROH8Q9H579 483 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 NMNAT1Q9HAN9 279 aaPredicted RBP12.22□□□□□ -0.45
SMAD1-215ENST00000515385 POMT2Q9UKY4 750 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 MGAT4BQ9UQ53 548 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 ENPP4Q9Y6X5 453 aa12.22□□□□□ -0.45
SMAD1-215ENST00000515385 TEX13CA0A0J9YWL9 993 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 GTPBP1O00178 669 aaKnown RBP12.21□□□□□ -0.45
SMAD1-215ENST00000515385 GPR171O14626 319 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 TLR5O60602 858 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 SOD1P00441 154 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 UGT2B7P16662 529 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 GDF5P43026 501 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 ARHGDIBP52566 201 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.45
SMAD1-215ENST00000515385 NTRK2Q16620 822 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 CPSF6Q16630 551 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMAD1-215ENST00000515385 ZNF770Q6IQ21 691 aaPredicted RBP12.21□□□□□ -0.45
SMAD1-215ENST00000515385 C3P1Q6ZMU1 363 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 RASSF6Q6ZTQ3 369 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 PRICKLE2Q7Z3G6 844 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 MIB1Q86YT6 1006 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 FAM26EQ8N5C1 309 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 MDGA1Q8NFP4 955 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 OR52I1Q8NGK6 324 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 TEX47Q8TBZ9 253 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 COPS8Q99627 209 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 THAP7Q9BT49 309 aaPredicted RBP12.21□□□□□ -0.45
SMAD1-215ENST00000515385 H2AFJQ9BTM1 129 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 ACTR6Q9GZN1 396 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 SLC35C2Q9NQQ7 365 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 HPF1Q9NWY4 346 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 KCTD5Q9NXV2 234 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 ZNF282Q9UDV7 671 aaPredicted RBP12.21□□□□□ -0.45
SMAD1-215ENST00000515385 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
SMAD1-215ENST00000515385 C1orf226A1L170 272 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 AGRPO00253 132 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 ST8SIA5O15466 376 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SLC28A2O43868 658 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SLC25A27O95847 323 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 C1QCP02747 245 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 NUDT7P0C024 238 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 AHCYP23526 432 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 AQP1P29972 269 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SSTR2P30874 369 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 NNMTP40261 264 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 AVPR1BP47901 424 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 FAM189BP81408 668 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 MAP4K2Q12851 820 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 MADCAM1Q13477 382 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 LRRC32Q14392 662 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 OPCMLQ14982 345 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 PTRHD1Q6GMV3 140 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 HSD17B13Q7Z5P4 300 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 KIAA0907Q7Z7F0 614 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 EIF4E3Q8N5X7 224 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 PPTC7Q8NI37 304 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 FOXJ1Q92949 421 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SIPA1Q96FS4 1042 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SCRN2Q96FV2 425 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 APIPQ96GX9 242 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 APOLD1Q96LR9 279 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SPOCK3Q9BQ16 436 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SLC32A1Q9H598 525 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 C11orf16Q9NQ32 467 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 MRPS18AQ9NVS2 196 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 TESQ9UGI8 421 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 GATCO43716 136 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 GPR32O75388 356 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms