RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SERTAD2Q14140 314 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 CHRFAM7AQ494W8 412 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 NHSL2Q5HYW2 709 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 TRIM40Q6P9F5 258 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 PAQR3Q6TCH7 311 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 THOC6Q86W42 341 aaKnown RBP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 DND1Q8IYX4 353 aaKnown RBP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 SLC15A4Q8N697 577 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 GPATCH11Q8N954 259 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 ZPLD1Q8TCW7 415 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 ATL1Q8WXF7 558 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 ABTB1Q969K4 478 aaPredicted RBP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 RILPQ96NA2 401 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 ZFP3Q96NJ6 502 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 GNRHR2Q96P88 292 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 FAM111AQ96PZ2 611 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 SERINC2Q96SA4 455 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 TRIM54Q9BYV2 358 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 LACRTQ9GZZ8 138 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 UBQLN3Q9H347 655 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 CXorf56Q9H5V9 222 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 COPS7BQ9H9Q2 264 aaPredicted RBP9.57□□□□□ -0.88
CLDND1-227ENST00000513452 FBXO5Q9UKT4 447 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 MAD1L1Q9Y6D9 718 aa9.57□□□□□ -0.88
CLDND1-227ENST00000513452 H0Y3Z8 333 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 HRKO00198 91 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 TLX2O43763 284 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 CD5LO43866 347 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 SMNDC1O75940 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 RCBTB2O95199 551 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 IGKV3-11P04433 115 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 PAX1P15863 534 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 CCKARP32238 428 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 NAGLUP54802 743 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 MTTPP55157 894 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 SRYQ05066 204 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 TBX2Q13207 712 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 NTRK2Q16620 822 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 CLEC12BQ2HXU8 276 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 TBCELQ5QJ74 424 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 SEL1L2Q5TEA6 688 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 FNDC7Q5VTL7 733 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 TMEM64Q6YI46 380 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 ZNF550Q7Z398 422 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 OR2L5Q8NG80 312 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 DOK4Q8TEW6 326 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 IGFBPL1Q8WX77 278 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 ANKRD9Q96BM1 317 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 ZC3HAV1LQ96H79 300 aaKnown RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 SENP5Q96HI0 755 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 REXO4Q9GZR2 422 aaKnown RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 C20orf96Q9NUD7 363 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 ZNF701Q9NV72 531 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-227ENST00000513452 TAS2R13Q9NYV9 303 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 SLC22A14Q9Y267 594 aa9.56□□□□□ -0.88
CLDND1-227ENST00000513452 USF3Q68DE3 2245 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 FREM3P0C091 2139 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 ZCWPW2A0A1B0GU75 182 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 ANKRD33BA6NCL7 494 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TNFSF13O75888 250 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 IPO7O95373 1038 aaKnown RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 FAM157CP0CG43 387 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TPSB2P20231 275 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 CD79BP40259 229 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 CDKN2DP55273 166 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 FBXW4P57775 412 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 CDK16Q00536 496 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 SLBPQ14493 270 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 RPS6KA2Q15349 733 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TPSAB1Q15661 275 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 RBM20Q5T481 1227 aaKnown RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 ABHD17CQ6PCB6 329 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TMIGD1Q6UXZ0 262 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 SLC29A4Q7RTT9 530 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 GSTA5Q7RTV2 222 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 YRDCQ86U90 279 aaKnown RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 OR4N5Q8IXE1 308 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 SYCE1Q8N0S2 351 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TTLQ8NG68 377 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 WNT2BQ93097 391 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 PPWD1Q96BP3 646 aaKnown RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 FBXL20Q96IG2 436 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 MARK4Q96L34 752 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 DGAT2Q96PD7 388 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 C19orf24Q9BVV8 132 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 TEX10Q9NXF1 929 aaPredicted RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 CLCF1Q9UBD9 225 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 REXO2Q9Y3B8 237 aaKnown RBP9.55□□□□□ -0.88
CLDND1-227ENST00000513452 KCNE2Q9Y6J6 123 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 IKBKGQ9Y6K9 419 aa9.55□□□□□ -0.88
CLDND1-227ENST00000513452 ABCA1O95477 2261 aa9.54□□□□□ -0.88
CLDND1-227ENST00000513452 A0A1W2PNV4 684 aa9.54□□□□□ -0.88
CLDND1-227ENST00000513452 A8MV72 311 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-227ENST00000513452 TP53I11O14683 189 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms