RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 ZNF544Q6NX49 715 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 RPUSD3Q6P087 351 aaKnown RBP2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ALKBH5Q6P6C2 394 aaKnown RBP2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ZNF730Q6ZMV8 503 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ANKRD46Q86W74 232 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 UNC45BQ8IWX7 931 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ARL14Q8N4G2 192 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ZNF713Q8N859 430 aaPredicted RBP2.4□□□□□ -2.03
LINC01088-210ENST00000513153 RNF149Q8NC42 400 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 OR2L5Q8NG80 312 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 VN1R17PQ8TDU5 208 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 SEPT8Q92599 483 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ST6GALNAC6Q969X2 333 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 EBF4Q9BQW3 602 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 DPEP3Q9H4B8 488 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 RABEP2Q9H5N1 569 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 PFDN4Q9NQP4 134 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ZNF319Q9P2F9 582 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 ANAPC5Q9UJX4 755 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 GMEB2Q9UKD1 530 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 TMCC3Q9ULS5 477 aa2.4□□□□□ -2.03
LINC01088-210ENST00000513153 KAT6BQ8WYB5 2073 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 IGHV3-35A0A0C4DH35 117 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 ANKDD1BA6NHY2 528 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 FAM86B1E9PN63 330 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 H7C0S8 307 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 TPM2P07951 284 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 FCGR3AP08637 254 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 FAM86B2P0C5J1 330 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 P4HA1P13674 534 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 PDGFRAP16234 1089 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 NDST1P52848 882 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 WNT4P56705 351 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 KRT83P78385 493 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 IQCCQ4KMZ1 466 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 FAM91A1Q658Y4 838 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 SPATA21Q7Z572 469 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 TIGD4Q8IY51 512 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 NUP93Q8N1F7 819 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 NKAIN3Q8N8D7 197 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 SPC24Q8NBT2 197 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 TCP11Q8WWU5 503 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 FRAT1Q92837 279 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-210ENST00000513153 RIT1Q92963 219 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 VPS33AQ96AX1 596 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 ERGIC2Q96RQ1 377 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 LMAN1LQ9HAT1 526 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 ELL3Q9HB65 397 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-210ENST00000513153 PFASO15067 1338 aa2.39□□□□□ -2.03
LINC01088-210ENST00000513153 TNRQ92752 1358 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 CCDC162PA2VCL2 907 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 CCSO14618 274 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 GPAA1O43292 621 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 DUSP11O75319 330 aaKnown RBP2.38□□□□□ -2.03
LINC01088-210ENST00000513153 B3GALNT1O75752 331 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 STAM2O75886 525 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 PRAMEF12O95522 483 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 GLULP15104 373 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 ADRA2CP18825 462 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TIA1P31483 386 aaKnown RBP eCLIP2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TNNT2P45379 298 aaPredicted RBP2.38□□□□□ -2.03
LINC01088-210ENST00000513153 CDO1Q16878 200 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 C1orf141Q5JVX7 400 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 LYPLAL1Q5VWZ2 237 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 SHEQ5VZ18 495 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 PET117Q6UWS5 81 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 C2orf66Q6UXQ4 117 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 GCNT7Q6ZNI0 430 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TMEM182Q6ZP80 229 aaPredicted RBP2.38□□□□□ -2.03
LINC01088-210ENST00000513153 CCDC186Q7Z3E2 898 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 THNSL1Q8IYQ7 743 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 CCDC170Q8IYT3 715 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 GPR137CQ8N3F9 429 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 ARL6IP6Q8N6S5 226 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 SMYD1Q8NB12 490 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 SAP25Q8TEE9 199 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TSPAN18Q96SJ8 248 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TTYH2Q9BSA4 534 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 INPP5KQ9BT40 448 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 HES7Q9BYE0 225 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 XPO4Q9C0E2 1151 aaKnown RBP2.38□□□□□ -2.03
LINC01088-210ENST00000513153 CUEDC2Q9H467 287 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TSPY26PQ9H489 355 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 IMPAD1Q9NX62 359 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 SPG21Q9NZD8 308 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 MOSPD1Q9UJG1 213 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 TMED7Q9Y3B3 224 aa2.38□□□□□ -2.03
LINC01088-210ENST00000513153 ARHGEF37A1IGU5 675 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 ILVBLA1L0T0 632 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 FRG2CA6NGY1 282 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 C5orf52A6NGY3 159 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 ZFP92A6NM28 416 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 M0R296 226 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 TGDSO95455 350 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 GBAP04062 536 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 SCG2P13521 617 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 MDKP21741 143 aaPredicted RBP2.37□□□□□ -2.03
LINC01088-210ENST00000513153 HPDP32754 393 aaPredicted RBP2.37□□□□□ -2.03
LINC01088-210ENST00000513153 EMC2Q15006 297 aa2.37□□□□□ -2.03
LINC01088-210ENST00000513153 WDR25Q64LD2 544 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms