RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-267	ENST00000512336	SLC5A11	Q8WWX8	675 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	SMPDL3B	Q92485	455 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	NEIL2	Q969S2	332 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	HSPBAP1	Q96EW2	488 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	DACH2	Q96NX9	599 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	WDR83	Q9BRX9	315 aa	Known RBP	11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	ZFP64	Q9NPA5	681 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	ACKR4	Q9NPB9	350 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	JKAMP	Q9P055	326 aa		11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	BOK	Q9UMX3	212 aa	Predicted RBP	11.22	□□□□□ -0.61
DDR1-267	ENST00000512336	KIAA1549	Q9HCM3	1950 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	SH3D21	A4FU49	640 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	ERICH4	A6NGS2	130 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	BMP7	P18075	431 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	PAM	P19021	973 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	SAT1	P21673	171 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	CTSS	P25774	331 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	HPD	P32754	393 aa	Predicted RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	SLC1A2	P43004	574 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	VPS41	P49754	854 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	RAB38	P57729	211 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	MAGOH	P61326	146 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	CRYZ	Q08257	329 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	DUSP8	Q13202	625 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	SP140	Q13342	867 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	THOC5	Q13769	683 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	CSHL1	Q14406	222 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	RBBP5	Q15291	538 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	KCTD19	Q17RG1	926 aa	Predicted RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	BBS9	Q3SYG4	887 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	TNFAIP8L3	Q5GJ75	292 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	SLC22A10	Q63ZE4	541 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	NSUN5P2	Q63ZY6	315 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	TDRP	Q86YL5	185 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	PALM2	Q8IXS6	379 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	PDIK1L	Q8N165	341 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	MORN4	Q8NDC4	146 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	TRPV3	Q8NET8	790 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	OR56A3	Q8NH54	315 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	DAZL	Q92904	295 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	PIGT	Q969N2	578 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	JSRP1	Q96MG2	331 aa	Predicted RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	CSF3R	Q99062	836 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	TIMP4	Q99727	224 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	RBM24	Q9BX46	236 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	SH2D2A	Q9NP31	389 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	NINJ2	Q9NZG7	142 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	LGALS13	Q9UHV8	139 aa		11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	TRMT6	Q9UJA5	497 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-267	ENST00000512336	ARID1A	O14497	2285 aa		11.21	□□□□□ -0.62
DDR1-267	ENST00000512336	NCKAP5	O14513	1909 aa		11.21	□□□□□ -0.62
DDR1-267	ENST00000512336	TCRBV7S3A2	A0A539	114 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	TLDC2	A0PJX2	215 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	EBAG9	O00559	213 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	TP73	O15350	636 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	LRAT	O95237	230 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	SERPINA6	P08185	405 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	HIST1H2AD	P20671	130 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	LSP1	P33241	339 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	OPRM1	P35372	400 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	ASPH	Q12797	758 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	ZNF791	Q3KP31	576 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	LRRC8E	Q6NSJ5	796 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	CASC4	Q6P4E1	433 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	ZNF595	Q8IYB9	648 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	MYO1H	Q8N1T3	1032 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	OR5L2	Q8NGL0	311 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	OR8K3	Q8NH51	312 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	OR14A16	Q8NHC5	309 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	SLC2A12	Q8TD20	617 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	BCAS4	Q8TDM0	211 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	PAQR8	Q8TEZ7	354 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	GAL3ST3	Q96A11	431 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	ISL2	Q96A47	359 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	ZNF669	Q96BR6	464 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	FAR2	Q96K12	515 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	HIST1H2AH	Q96KK5	128 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	TRIB1	Q96RU8	372 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	HIST1H2AJ	Q99878	128 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	H2AFJ	Q9BTM1	129 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	NPL	Q9BXD5	320 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	PROK2	Q9HC23	129 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	QPCTL	Q9NXS2	382 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	ARL15	Q9NXU5	204 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	GALNT8	Q9NY28	637 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	CAMK2A	Q9UQM7	478 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	EIF3L	Q9Y262	564 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	MRPS33	Q9Y291	106 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	COMMD10	Q9Y6G5	202 aa		11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	SON	P18583	2426 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-267	ENST00000512336	C17orf105	B2RV13	164 aa		11.19	□□□□□ -0.62
DDR1-267	ENST00000512336		E7ESA3	106 aa		11.19	□□□□□ -0.62
DDR1-267	ENST00000512336	NDUFAB1	O14561	156 aa		11.19	□□□□□ -0.62
DDR1-267	ENST00000512336	CASK	O14936	926 aa		11.19	□□□□□ -0.62
DDR1-267	ENST00000512336	ERI3	O43414	337 aa	Known RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms