RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SIGLEC12Q96PQ1 595 aa14.81□□□□□ -0.04
DDX41-214ENST00000512334 PELOQ9BRX2 385 aaKnown RBP14.81□□□□□ -0.04
DDX41-214ENST00000512334 CNPPD1Q9BV87 410 aa14.81□□□□□ -0.04
DDX41-214ENST00000512334 FAIM2Q9BWQ8 316 aa14.81□□□□□ -0.04
DDX41-214ENST00000512334 LIN28AQ9H9Z2 209 aaKnown RBP14.81□□□□□ -0.04
DDX41-214ENST00000512334 TNFRSF12AQ9NP84 129 aa14.81□□□□□ -0.04
DDX41-214ENST00000512334 KLHL1Q9NR64 748 aa14.81□□□□□ -0.04
DDX41-214ENST00000512334 LRFN1Q9P244 771 aa14.81□□□□□ -0.04
DDX41-214ENST00000512334 GNG14A0A1W2PPG7 69 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 C1orf226A1L170 272 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 TCP11X1B4DZS4 312 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 CTIFO43310 598 aaKnown RBP14.8□□□□□ -0.04
DDX41-214ENST00000512334 TYROBPO43914 113 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 PRKNO60260 465 aaPredicted RBP14.8□□□□□ -0.04
DDX41-214ENST00000512334 ITGA10O75578 1167 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 MYZAPP0CAP1 466 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 UROSP10746 265 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 CD46P15529 392 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 GNLYP22749 145 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 UQCRFS1P47985 274 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 ZNF468Q5VIY5 522 aaPredicted RBP14.8□□□□□ -0.04
DDX41-214ENST00000512334 CLEC6AQ6EIG7 209 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 RPUSD3Q6P087 351 aaKnown RBP14.8□□□□□ -0.04
DDX41-214ENST00000512334 DGAT2L6Q6ZPD8 337 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 CROCCP2Q86T23 111 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 OR4K14Q8NGD5 310 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 RIT1Q92963 219 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 TM4SF18Q96CE8 201 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 SENP5Q96HI0 755 aaPredicted RBP14.8□□□□□ -0.04
DDX41-214ENST00000512334 ART5Q96L15 291 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 C5orf34Q96MH7 638 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 TRMOQ9BU70 441 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 EBPLQ9BY08 206 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 MCM8Q9UJA3 840 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 PCDHA9Q9Y5H5 950 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 SHANK1Q9Y566 2161 aa14.8□□□□□ -0.04
DDX41-214ENST00000512334 WWP2O00308 870 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 AZIN1O14977 448 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 NPHS1O60500 1241 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 ERAL1O75616 437 aaKnown RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 RASAL1O95294 804 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 ZIC2O95409 532 aaPredicted RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 SLC35E2P0CK97 266 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 TRA2BP62995 288 aaKnown RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 ERVK-8P63133 956 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 RAE1P78406 368 aaKnown RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 ZNF267Q14586 743 aaPredicted RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 NR6A1Q15406 480 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 INAQ16352 499 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 LRIG3Q6UXM1 1119 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 C16orf47Q6ZP98 133 aaPredicted RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 ZCCHC23Q6ZST2 131 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 EXOC3L1Q86VI1 746 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 MMP21Q8N119 569 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 BCORP1Q8N888 145 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 MDS2Q8NDY4 140 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 ZNF721Q8TF20 911 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 FAR1Q8WVX9 515 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 GCN1Q92616 2671 aaKnown RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 HES7Q9BYE0 225 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 RRAGDQ9NQL2 400 aaPredicted RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 OLAHQ9NV23 265 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 ERVK-19Q9WJR5 959 aa14.79□□□□□ -0.04
DDX41-214ENST00000512334 YARS2Q9Y2Z4 477 aaKnown RBP14.79□□□□□ -0.04
DDX41-214ENST00000512334 NBASA2RRP1 2371 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 HELZ2Q9BYK8 2649 aaKnown RBP14.78□□□□□ -0.04
DDX41-214ENST00000512334 A0A1W2PS29 197 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 SERTM1A2A2V5 107 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 HRKO00198 91 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 CDK2AP1O14519 115 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 SLC25A12O75746 678 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 OR2J2O76002 312 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 NEURL1O76050 574 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 CHEK2O96017 543 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 CHRNGP07510 517 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 BPGMP07738 259 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 TIA1P31483 386 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX41-214ENST00000512334 TRHRP34981 398 aaPredicted RBP14.78□□□□□ -0.04
DDX41-214ENST00000512334 HLCSP50747 726 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 SSR4P51571 173 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 XKP51811 444 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 RNF4P78317 190 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 MRPL49Q13405 166 aaKnown RBP14.78□□□□□ -0.04
DDX41-214ENST00000512334 ELOAQ14241 798 aaKnown RBP14.78□□□□□ -0.04
DDX41-214ENST00000512334 MAPKAPK3Q16644 382 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 ZNF750Q32MQ0 723 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 ARL13AQ5H913 290 aaPredicted RBP14.78□□□□□ -0.04
DDX41-214ENST00000512334 C6orf163Q5TEZ5 329 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 SLC48A1Q6P1K1 146 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 ARMC10Q8N2F6 343 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 TMEM178AQ8NBL3 297 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 OR5L2Q8NGL0 311 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 OR8K3Q8NH51 312 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 CDC26Q8NHZ8 85 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 PPP1R14CQ8TAE6 165 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 ASB15Q8WXK1 588 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 TMEM125Q96AQ2 219 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 KLHL29Q96CT2 875 aa14.78□□□□□ -0.04
DDX41-214ENST00000512334 FBXL20Q96IG2 436 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms