RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 MEP1AQ16819 746 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 BEND6Q5SZJ8 279 aaPredicted RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 C9orf40Q8IXQ3 194 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 TANKQ92844 425 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 CCDC126Q96EE4 140 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 C11orf24Q96F05 449 aaPredicted RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 VMP1Q96GC9 406 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 CENPKQ9BS16 269 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 RNF32Q9H0A6 362 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 CENPHQ9H3R5 247 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 PCDHA9Q9Y5H5 950 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 CLCA3PQ9Y6N3 262 aa12.61□□□□□ -0.39
SNF8-206ENST00000509989 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
SNF8-206ENST00000509989 ITM2AO43736 263 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 KLHL41O60662 606 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 LYPLA1O75608 230 aaPredicted RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 IL3P08700 152 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 SSTR4P31391 388 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 BUD31P41223 144 aaPredicted RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 HK2P52789 917 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 MAPK12P53778 367 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 ERVK-8P63133 956 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 KCNC4Q03721 635 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 GTF3C1Q12789 2109 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 CSTF3Q12996 717 aaKnown RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 DUSP8Q13202 625 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 RCN2Q14257 317 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 ZNF267Q14586 743 aaPredicted RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 TERF2Q15554 542 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 EIF2S3LQ2VIR3 472 aaKnown RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 UGT3A2Q3SY77 523 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 CFAP157Q5JU67 520 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 FAM111BQ6SJ93 734 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 MDGA2Q7Z553 956 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 ARMC10Q8N2F6 343 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 TMEM132CQ8N3T6 1108 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 SLC5A8Q8N695 610 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 MORN4Q8NDC4 146 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 OR6Y1Q8NGX8 325 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 OR14A16Q8NHC5 309 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 AGR3Q8TD06 166 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 SENP5Q96HI0 755 aaPredicted RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 DGAT2Q96PD7 388 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 SMC6Q96SB8 1091 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 ANKRA2Q9H9E1 313 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 MS4A12Q9NXJ0 267 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 ADAM29Q9UKF5 820 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 EXO1Q9UQ84 846 aaKnown RBP12.6□□□□□ -0.39
SNF8-206ENST00000509989 ERVK-19Q9WJR5 959 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 SPACA6W5XKT8 324 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 COL12A1Q99715 3063 aa12.6□□□□□ -0.39
SNF8-206ENST00000509989 TRAV17A0A0B4J275 112 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 A0A1W2PRS3 328 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 RGS16O15492 202 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 PCDH7O60245 1069 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 PRAMEF2O60811 474 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 ITGA10O75578 1167 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 OR2J2O76002 312 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 OR6B1O95007 311 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 CBX6O95503 412 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 BPGMP07738 259 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 TACR1P25103 407 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 FEN1P39748 380 aaKnown RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 ALDH9A1P49189 494 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 TAS2R50P59544 299 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 RNF4P78317 190 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 OC90Q02509 493 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 MGAT2Q10469 447 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 SERTAD2Q14140 314 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 LTB4RQ15722 352 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 ARL13AQ5H913 290 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 ZNF766Q5HY98 468 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 ZNF324BQ6AW86 544 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 OR52E8Q6IFG1 317 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 Q6ZSR9 355 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 GALNTL5Q7Z4T8 443 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 C16orf78Q8WTQ4 265 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 NUDT8Q8WV74 236 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 CNRIP1Q96F85 164 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 SCMH1Q96GD3 660 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 UTP23Q9BRU9 249 aaKnown RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 CNPPD1Q9BV87 410 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 C20orf27Q9GZN8 174 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 IQCGQ9H095 443 aaKnown RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 TSPAN10Q9H1Z9 355 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 CLMPQ9H6B4 373 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 AHSPQ9NZD4 102 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 LRFN1Q9P244 771 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 DTX4Q9Y2E6 619 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 DLGAP4Q9Y2H0 992 aa12.59□□□□□ -0.39
SNF8-206ENST00000509989 POLR3HQ9Y535 204 aaPredicted RBP12.59□□□□□ -0.39
SNF8-206ENST00000509989 POLEQ07864 2286 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 SERTM1A2A2V5 107 aa12.58□□□□□ -0.4
SNF8-206ENST00000509989 PINLYPA6NC86 204 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms