RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 BNC2Q6ZN30 1099 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 LINC00696Q6ZRV3 163 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CRLF3Q8IUI8 442 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 C1orf52Q8N6N3 182 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CCNYL1Q8N7R7 359 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CATSPER1Q8NEC5 780 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 FBXO27Q8NI29 283 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 RDH11Q8TC12 318 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 ELP5Q8TE02 316 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PTPMT1Q8WUK0 201 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 FCRL1Q96LA6 429 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 KCNC2Q96PR1 638 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 SORT1Q99523 831 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 SPOCK3Q9BQ16 436 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 TBCDQ9BTW9 1192 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 NPLQ9BXD5 320 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 ROPN1BQ9BZX4 212 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 RASSF4Q9H2L5 321 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 ROPN1Q9HAT0 212 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 LYRM4Q9HD34 91 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PRTFDC1Q9NRG1 225 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 RIC8BQ9NVN3 520 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PLA2G3Q9NZ20 509 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 DCDC2Q9UHG0 476 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 FBXW2Q9UKT8 454 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CES1P1Q9UKY3 287 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PPIEQ9UNP9 301 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 DLGAP4Q9Y2H0 992 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 MMACHCQ9Y4U1 282 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 EXPH5Q8NEV8 1989 aa6.71□□□□□ -1.33
TOPBP1-207ENST00000509162 ASH1LQ9NR48 2969 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 A0A0G2JMM0 328 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 A0A1W2PPB8 328 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 A0A1W2PRS3 328 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 CCDC151A5D8V7 595 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 KIR3DP1A8MWS1 328 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PEX12O00623 359 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 GNB5O14775 395 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SMAD7O15105 426 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PGRMC2O15173 223 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PROM1O43490 865 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NME6O75414 186 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MYO1DO94832 1006 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NADKO95544 446 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 WDPCPO95876 746 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 IGKV3-11P04433 115 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 BPGMP07738 259 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NR2F6P10588 404 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TAC1P20366 129 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TACR1P25103 407 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NR0B1P51843 470 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MLLT10P55197 1068 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PKNOX1P55347 436 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 OR4D2P58180 307 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PMP22Q01453 160 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 FOLH1Q04609 750 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MGAT2Q10469 447 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SLAMF1Q13291 335 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MFAP5Q13361 173 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 CASP8Q14790 479 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 KIAA0040Q15053 153 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 LTB4RQ15722 352 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NSDHLQ15738 373 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MPEG1Q2M385 716 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 CCDC153Q494R4 210 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PLEKHN1Q494U1 663 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF385BQ569K4 471 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 XKR7Q5GH72 579 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 JMJD6Q6NYC1 403 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 IGFL3Q6UXB1 125 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 LRIG3Q6UXM1 1119 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 Q6ZS92 163 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 Q6ZSR9 355 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NUDT13Q86X67 352 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SLC22A9Q8IVM8 553 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 C9orf40Q8IXQ3 194 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 BEST3Q8N1M1 668 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 ARMC10Q8N2F6 343 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TBC1D19Q8N5T2 526 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 CLEC1AQ8NC01 280 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 DNAJB14Q8TBM8 379 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 CHTF18Q8WVB6 975 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SELENOMQ8WWX9 145 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 UBE2E3Q969T4 207 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NCLNQ969V3 563 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MIB2Q96AX9 1013 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 NACC2Q96BF6 587 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 C19orf60Q96EN9 201 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 C3orf30Q96M34 536 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 FER1L6-AS2Q96M78 137 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PTCHD1Q96NR3 888 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SIGLEC12Q96PQ1 595 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TAAR6Q96RI8 345 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TUBB6Q9BUF5 446 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 EBPLQ9BY08 206 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 LHPPQ9H008 270 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 LIN28AQ9H9Z2 209 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms