RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OR10H2O60403 315 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF354AO60765 605 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ESRRAP11474 423 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ALOX15P16050 662 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 HERVK_113P63132 956 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ERVK-8P63133 956 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 IGLV3-21P80748 117 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 IFT88Q13099 833 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 SLC29A2Q14542 456 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 KRTCAP3Q53RY4 240 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 MRM1Q6IN84 353 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 LETMD1Q6P1Q0 360 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 METTL2BQ6P1Q9 378 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ADGRD1Q6QNK2 874 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 GHDCQ8N2G8 530 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 TRPC4APQ8TEL6 797 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF483Q8TF39 744 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 RBM18Q96H35 190 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 SENP5Q96HI0 755 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 GAL3ST4Q96RP7 486 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 SERPINI1Q99574 410 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 NTMT1Q9BV86 223 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ERVK-6Q9BXR3 956 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ELOVL6Q9H5J4 265 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 DDX31Q9H8H2 851 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 DEPPQ9NTK1 212 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 TEX10Q9NXF1 929 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 SLC12A4Q9UP95 1085 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 ERVK-19Q9WJR5 959 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 FAM166BA8MTA8 275 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 FOXO6A8MYZ6 492 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 CDK2AP1O14519 115 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 DYRK3O43781 588 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 PDE9AO76083 593 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 OR4F21O95013 312 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 OTCP00480 354 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 PDYNP01213 254 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 KLK1P06870 262 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 NR0B1P51843 470 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 PLGLB1Q02325 96 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 ASPHQ12797 758 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF267Q14586 743 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 TCHHL1Q5QJ38 904 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 MRGPRGQ86SM5 289 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 C9orf40Q8IXQ3 194 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 TMEM151AQ8N4L1 468 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 ITLN2Q8WWU7 325 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 MTBPQ96DY7 904 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 WDR41Q9HAD4 459 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
UBE2D3-228ENST00000508974 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 SMIM23A6NLE4 172 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 PGRMC2O15173 223 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 SUPT7LO94864 414 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 GPR75O95800 540 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 TAC1P20366 129 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 ARFIP1P53367 373 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 CCNYL2Q5T2Q4 361 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 ST13P4Q8IZP2 240 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 CDYL2Q8N8U2 506 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 POGLUT1Q8NBL1 392 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 OR52N2Q8NGI0 321 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 OR5L2Q8NGL0 311 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 SELENOMQ8WWX9 145 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 FBXL20Q96IG2 436 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 TMEM237Q96Q45 408 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 TXLNGYQ9BZA5 131 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 DEFB127Q9H1M4 99 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 EPB41L4BQ9H329 900 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF835Q9Y2P0 537 aa13.71□□□□□ -0.21
UBE2D3-228ENST00000508974 NCKAP5O14513 1909 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 A0A1B0GTH9 108 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 DLX3O60479 287 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 SEMA3DO95025 777 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 LRATO95237 230 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 IGKV3-11P04433 115 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 CCL3P10147 92 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 PIK3R1P27986 724 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 GRNP28799 593 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 HSD17B3P37058 310 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 SLCO1A2P46721 670 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 DNASE1L1P49184 302 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 ADORA2A-AS1P86434 159 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 CLCQ05315 142 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 GGTA1PQ4G0N0 100 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 UNC50Q53HI1 259 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 CMPK2Q5EBM0 449 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 ZNF678Q5SXM1 525 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 OR52E8Q6IFG1 317 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 RNF111Q6ZNA4 994 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 TIFABQ6ZNK6 161 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 RTL4Q6ZR62 310 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 COMMD6Q7Z4G1 85 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 CHERPQ8IWX8 916 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 GPALPP1Q8IXQ4 340 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms