RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 OR2T4Q8NH00 348 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 OR4L1Q8NH43 312 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 KIAA1191Q96A73 305 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 APIPQ96GX9 242 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PPP1R16AQ96I34 528 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ABHD1Q96SE0 405 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 P2RY13Q9BPV8 354 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CPPED1Q9BRF8 314 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SARGQ9BW04 601 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 NLNQ9BYT8 704 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ARHGAP39Q9C0H5 1083 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 TMEM245Q9H330 911 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PPP1R3EQ9H7J1 279 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 LRTM1Q9HBL6 345 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 DLL4Q9NR61 685 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 KLHL1Q9NR64 748 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 IMP3Q9NV31 184 aaKnown RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CLN6Q9NWW5 311 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 NDUFAF4Q9P032 175 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ACSL5Q9ULC5 683 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 STUB1Q9UNE7 303 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ZFR2Q9UPR6 939 aaKnown RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ABHD14A-ACY1A0A1B0GW23 586 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 METTL21EPA6NDL7 271 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 L7N2F9 121 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 LDB2O43679 373 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CCNDBP1O95273 360 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SCG5P05408 212 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CBSLP0DN79 551 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ETFAP13804 333 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 NFYBP25208 207 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 LCN1P31025 176 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PTGER1P34995 402 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CBSP35520 551 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 BDKRB1P46663 353 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 GZMMP51124 257 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 GEMP55040 296 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 MLLT1Q03111 559 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SOX4Q06945 474 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 TSTA3Q13630 321 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 GUCA2BQ16661 112 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ZNF791Q3KP31 576 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 FBXO43Q4G163 708 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 TIGD3Q6B0B8 471 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PAQR9Q6ZVX9 377 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ZNF367Q7RTV3 350 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 MARCH9Q86YJ5 346 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 LIX1LQ8IVB5 337 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SERPINA12Q8IW75 414 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CMIPQ8IY22 773 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SYNPOQ8N3V7 929 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 OR7G3Q8NG95 312 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 BTN2A2Q8WVV5 523 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ZFPM2Q8WW38 1151 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 FAM151AQ8WW52 585 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ACOT12Q8WYK0 555 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 KAT2AQ92830 837 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ORAI1Q96D31 301 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 FCRL2Q96LA5 508 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 KCTD7Q96MP8 289 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SLC38A3Q99624 504 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SEMA3CQ99985 751 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 TSSK6Q9BXA6 273 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 CACNG6Q9BXT2 260 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SEMA4CQ9C0C4 833 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ARL6Q9H0F7 186 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PIGUQ9H490 435 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 LDAHQ9H6V9 325 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PRMT8Q9NR22 394 aaPredicted RBP6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 PDGFCQ9NRA1 345 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 ELOVL2Q9NXB9 296 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 TAS2R13Q9NYV9 303 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 NTMQ9P121 344 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 MAPRE3Q9UPY8 281 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 MAP4K5Q9Y4K4 846 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 SESN1Q9Y6P5 492 aa6.92□□□□□ -1.3
LIMCH1-207ENST00000508466 LRIT2A6NDA9 550 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 ZBTB42B2RXF5 422 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 SLC28A1O00337 649 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 SLC43A1O75387 559 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 RECKO95980 971 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 DHFRP00374 187 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 APOC1P02654 83 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 KLK3P07288 261 aaPredicted RBP6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 RPS17P08708 135 aaKnown RBP6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 ODC1P11926 461 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 ACHEP22303 614 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 GNPDA1P46926 289 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 MC2RQ01718 297 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 ATXN7L3Q14CW9 347 aaPredicted RBP6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 ANGPT1Q15389 498 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 IER5LQ5T953 404 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 FAHD1Q6P587 224 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 CLEC20AQ6ZU45 233 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 PTOV1Q86YD1 416 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 CFAP52Q8N1V2 620 aa6.91□□□□□ -1.3
LIMCH1-207ENST00000508466 GPR156Q8NFN8 814 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms