RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 OMA1Q96E52 524 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 AKR1E2Q96JD6 320 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 SEPT5Q99719 369 aaPredicted RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ELOVL3Q9HB03 270 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ASCL3Q9NQ33 180 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 INTS9Q9NV88 658 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 PARVAQ9NVD7 372 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM248Q9NWD8 314 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 MYEF2Q9P2K5 600 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 MRM2Q9UI43 246 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF639Q9UID6 485 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 PHF11Q9UIL8 331 aa7.08□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM265A0A087WTH1 108 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM129A0AVI4 362 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 NEMP2A6NFY4 417 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 A8MUA0 341 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 PI15O43692 258 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 GMNNO75496 209 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 UPP2O95045 317 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 OAZ2O95190 189 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LUC7L3O95232 432 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CD2BP2O95400 341 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 OCMP0CE72 109 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CPN1P15169 458 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 PNLIPP16233 465 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 MMP15P51511 669 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 POLR2LP62875 67 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CHRNB3Q05901 458 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ABHD17BQ5VST6 288 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC22A10Q63ZE4 541 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SIGLEC15Q6ZMC9 328 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 RNF144BQ7Z419 303 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF546Q86UE3 836 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 HIPK1Q86Z02 1210 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 BOD1L2Q8IYS8 172 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SLC38A6Q8IZM9 456 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LINC00518Q8N0U6 118 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM123Q8N131 208 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 GABRG1Q8N1C3 465 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 MARVELD2Q8N4S9 558 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LRRC17Q8N6Y2 441 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 C2CD4CQ8TF44 421 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 UBTD2Q8WUN7 234 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM171Q8WVE6 324 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 P3H4Q92791 437 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TMEM143Q96AN5 459 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 C3orf30Q96M34 536 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 NPAS1Q99742 590 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 DHRS9Q9BPW9 319 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TKTL2Q9H0I9 626 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LPAR2Q9HBW0 351 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 FRRS1LQ9P0K9 344 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 UVRAGQ9P2Y5 699 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 NOX1Q9Y5S8 564 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CAPN6Q9Y6Q1 641 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 DLC1Q96QB1 1528 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 GNG14A0A1W2PPG7 69 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 C1orf226A1L170 272 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 MANSC4A6NHS7 340 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ARHGEF33A8MVX0 844 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 NPIPB8E9PQR5 432 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 FLRT2O43155 660 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF217O75362 1048 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ALDOAP04075 364 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 DPP4P27487 766 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 APEX1P27695 318 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SERPINB1P30740 379 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CRHR1P34998 444 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ZNF75DP51815 510 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 DUSP8Q13202 625 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 KCNMB1Q16558 191 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 KIF19Q2TAC6 998 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ITPRIPL2Q3MIP1 535 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SOWAHCQ53LP3 525 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SSX9Q7RTT3 188 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SCD5Q86SK9 330 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TSPAN33Q86UF1 283 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ZBED8Q8IZ13 594 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LCORLQ8N3X6 602 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 TEX26Q8N6G2 289 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 C1orf52Q8N6N3 182 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 OR52N1Q8NH53 320 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 MOAP1Q96BY2 351 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 DGCR14Q96DF8 476 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 LMLNQ96KR4 655 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SFXN2Q96NB2 322 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 MS4A10Q96PG2 267 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CMKLR1Q99788 373 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 BCL2L14Q9BZR8 327 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SRRQ9GZT4 340 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 SPHK1Q9NYA1 384 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 CIDEBQ9UHD4 219 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 ZFP69BQ9UJL9 534 aa7.07□□□□□ -1.28
PDGFRA-206ENST00000508170 NPEPPSL1A6NEC2 478 aa7.06□□□□□ -1.28
PDGFRA-206ENST00000508170 NPIPA7E9PJI5 369 aa7.06□□□□□ -1.28
PDGFRA-206ENST00000508170 GPR25O00155 361 aa7.06□□□□□ -1.28
PDGFRA-206ENST00000508170 LYPLA2O95372 231 aa7.06□□□□□ -1.28
PDGFRA-206ENST00000508170 F10P00742 488 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms