RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	DNAJB8	Q8NHS0	232 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	RDH11	Q8TC12	318 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZNF721	Q8TF20	911 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	AGAP11	Q8TF27	550 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	NR4A3	Q92570	626 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CAVIN3	Q969G5	261 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	TMEM125	Q96AQ2	219 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SCMH1	Q96GD3	660 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SENP5	Q96HI0	755 aa	Predicted RBP	13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SLX1A	Q9BQ83	275 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CNPPD1	Q9BV87	410 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SHCBP1L	Q9BZQ2	653 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	OXSM	Q9NWU1	459 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	MYOT	Q9UBF9	498 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	OSGIN2	Q9Y236	505 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	YARS2	Q9Y2Z4	477 aa	Known RBP	13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	COL12A1	Q99715	3063 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	DOPEY2	Q9Y3R5	2298 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZGRF1	Q86YA3	2104 aa		13.15	□□□□□ -0.3
CCHCR1-222	ENST00000507459	FLNC	Q14315	2725 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459		A0A1W2PS29	197 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CCDC151	A5D8V7	595 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TMEM200C	A6NKL6	621 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HRK	O00198	91 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	UBFD1	O14562	309 aa	Known RBP	13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SPAG7	O75391	227 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CRCP	O75575	148 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HSD3B1	P14060	373 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HSD3B2	P26439	372 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MST1	P26927	711 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PIK3R1	P27986	724 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TRHR	P34981	398 aa	Predicted RBP	13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FOXA1	P55317	472 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	KCNK10	P57789	538 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ERVK-8	P63133	956 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RNF4	P78317	190 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HMGCS1	Q01581	520 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	BTK	Q06187	659 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF267	Q14586	743 aa	Predicted RBP	13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	OR52E8	Q6IFG1	317 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TRABD2A	Q86V40	505 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF227	Q86WZ6	799 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	C10orf107	Q8IVU9	208 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CYP4Z2P	Q8N1L4	340 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ARMC10	Q8N2F6	343 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	OR4K14	Q8NGD5	310 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ASB15	Q8WXK1	588 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RIT1	Q92963	219 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	APOPT1	Q96IL0	206 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ERVK-11	Q9UQG0	969 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ERVK-19	Q9WJR5	959 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PCDHGB6	Q9Y5F9	930 aa		13.14	□□□□□ -0.31
CCHCR1-222	ENST00000507459		A8MVJ9	347 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CDK2AP1	O14519	115 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NME2P1	O60361	137 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GUCY1B2	O75343	617 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NME2	P22392	152 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SERPINB3	P29508	390 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	DEK	P35659	375 aa	Known RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ALDH9A1	P49189	494 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	XK	P51811	444 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TDGF1P3	P51864	188 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HK2	P52789	917 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	DNAJB13	P59910	316 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CSTF3	Q12996	717 aa	Known RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF750	Q32MQ0	723 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	LIPM	Q5VYY2	423 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	IL20RB	Q6UXL0	311 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GFRAL	Q6UXV0	394 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FRMD7	Q6ZUT3	714 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MMP21	Q8N119	569 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GBP7	Q8N8V2	638 aa	Predicted RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	BANP	Q8N9N5	519 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FAM98A	Q8NCA5	519 aa	Known RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	OR5L2	Q8NGL0	311 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CHTF18	Q8WVB6	975 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZBTB9	Q96C00	473 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TM4SF18	Q96CE8	201 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ART5	Q96L15	291 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FAM111A	Q96PZ2	611 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PELO	Q9BRX2	385 aa	Known RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ACPT	Q9BZG2	426 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HPF1	Q9NWY4	346 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	LGALS13	Q9UHV8	139 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MID2	Q9UJV3	735 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PLLP	Q9Y342	182 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PCDHA9	Q9Y5H5	950 aa		13.13	□□□□□ -0.31
CCHCR1-222	ENST00000507459	C1orf226	A1L170	272 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ERAL1	O75616	437 aa	Known RBP	13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	WISP2	O76076	250 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	OR6B1	O95007	311 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	UNC5C	O95185	931 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC35E2	P0CK97	266 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SOX3	P41225	446 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NAA20	P61599	178 aa		13.12	□□□□□ -0.31

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