RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SEC16AO15027 2179 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 TBX19O60806 448 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 SEMA7AO75326 666 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 IGFBP5P24593 272 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 CCR5P51681 352 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 PUM1Q14671 1186 aaKnown RBP eCLIP11.52□□□□□ -0.56
LIN54-206ENST00000506560 RBM45Q8IUH3 476 aaKnown RBP11.52□□□□□ -0.56
LIN54-206ENST00000506560 XAGE5Q8WWM1 108 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 KAT2AQ92830 837 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 SPATA9Q9BWV2 254 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 RBM38Q9H0Z9 239 aaKnown RBP11.52□□□□□ -0.56
LIN54-206ENST00000506560 OR51I1Q9H343 314 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 C8orf4Q9NR00 106 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 GPR27Q9NS67 375 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 ZCCHC3Q9NUD5 404 aaKnown RBP11.52□□□□□ -0.56
LIN54-206ENST00000506560 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.56
LIN54-206ENST00000506560 H0YAE9 185 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 PROM1O43490 865 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 HPRP00739 348 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 CTSEP14091 401 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 JUNDP17535 347 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 SIM1P81133 766 aaPredicted RBP11.52□□□□□ -0.57
LIN54-206ENST00000506560 CD47Q08722 323 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 RAPSNQ13702 412 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 RUNX2Q13950 521 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 GPR32P1Q8NGA4 272 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 OR5T3Q8NGG3 340 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 OR9A2Q8NGT5 310 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 CNIH3Q8TBE1 160 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 HLA-CQ95604 372 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 KLHDC7BQ96G42 594 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 BBS4Q96RK4 519 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 QRSL1Q9H0R6 528 aaKnown RBP11.52□□□□□ -0.57
LIN54-206ENST00000506560 FAM60AQ9NP50 221 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 EQTNQ9NQ60 294 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 TAS2R7Q9NYW3 318 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 BAG5Q9UL15 447 aa11.52□□□□□ -0.57
LIN54-206ENST00000506560 H0YGG7 62 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 CASC3O15234 703 aaKnown RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 FPR1P21462 350 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 DNAJA1P31689 397 aaKnown RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 CLK3P49761 638 aaKnown RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 CDH12P55289 794 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 ARF3P61204 181 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 LASP1Q14847 261 aaKnown RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 KIR2DS3Q14952 304 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 ZNF630Q2M218 657 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 HIPK1Q86Z02 1210 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 SIX5Q8N196 739 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 OR4D11Q8NGI4 311 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 NCSTNQ92542 709 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 CDX2Q99626 313 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 RHNO1Q9BSD3 238 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 GSDMCQ9BYG8 508 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 TWSG1Q9GZX9 223 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 REEP1Q9H902 201 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 NEUROD4Q9HD90 331 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 ETAA1Q9NY74 926 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 IFT80Q9P2H3 777 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 ANKMY1Q9P2S6 941 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 TRPC4Q9UBN4 977 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 LYVE1Q9Y5Y7 322 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 LOC100130705A0A1B0GUX0 176 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 SDC3O75056 442 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 MC3RP41968 323 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 RPS15AP62244 130 aaKnown RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 HHEXQ03014 270 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 FUT5Q11128 374 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 MYBPC3Q14896 1274 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 CRB2Q5IJ48 1285 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 KDM4DQ6B0I6 523 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 SLC48A1Q6P1K1 146 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 PIWIL3Q7Z3Z3 882 aaKnown RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 LACC1Q8IV20 430 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 CCDC71Q8IV32 467 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 ADNPQ9H2P0 1102 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 ACSS1Q9NUB1 689 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 PADI2Q9Y2J8 665 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 CFAP54Q96N23 3096 aa11.51□□□□□ -0.57
LIN54-206ENST00000506560 ARID1BQ8NFD5 2236 aaPredicted RBP11.51□□□□□ -0.57
LIN54-206ENST00000506560 ANKRD33BA6NCL7 494 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 TRIM64A6NGJ6 449 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 CHURC1-FNTBB4DL54 471 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 HMGN2P05204 90 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 DRD2P14416 443 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 LIM2P55344 173 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 RBBP4Q09028 425 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 IFI44LQ53G44 452 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 REEP3Q6NUK4 255 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 CCDC80Q76M96 950 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 THAP5Q7Z6K1 395 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 TMEM52Q8NDY8 209 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 CHDHQ8NE62 594 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 OR9Q2Q8NGE9 314 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 PSMA8Q8TAA3 256 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms