RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 DMRT3Q9NQL9 472 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 KCMF1Q9P0J7 381 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 TINAGQ9UJW2 476 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF835Q9Y2P0 537 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 ASB1Q9Y576 335 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 DNAJC13O75165 2243 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 CACNA1CQ13936 2221 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 CREBBPQ92793 2442 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 ARHGAP10A1A4S6 786 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 TRIM49D1C9J1S8 452 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 SAP18O00422 153 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 RTCAO00442 366 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 KLK8O60259 260 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 OR2J2O76002 312 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 ALDOAP04075 364 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 COL6A2P12110 1019 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 MTHFD2P13995 350 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 GMPRP36959 345 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 STT3AP46977 705 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 CCT5P48643 541 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 RNF4P78317 190 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 TNFRSF17Q02223 184 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 PLGLB1Q02325 96 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 TBL3Q12788 808 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 CUL3Q13618 768 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 CPSF6Q16630 551 aaKnown RBP eCLIP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 UBAP2Q5T6F2 1119 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 C6orf163Q5TEZ5 329 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 TTC19Q6DKK2 380 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 IL20RBQ6UXL0 311 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 RTL4Q6ZR62 310 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 GK5Q6ZS86 529 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 GOLGA7Q7Z5G4 137 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 UBE3DQ7Z6J8 389 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 LCA5Q86VQ0 697 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 NUDT13Q86X67 352 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 SIAH3Q8IW03 269 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 SLC22A8Q8TCC7 542 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 SLC2A12Q8TD20 617 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 PTPMT1Q8WUK0 201 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 ATP6V1G3Q96LB4 118 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 MTERF1Q99551 399 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 IQCGQ9H095 443 aaKnown RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 PSD3Q9NYI0 1048 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 COQ3Q9NZJ6 369 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF223Q9UK11 482 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-222ENST00000506018 MEMO1Q9Y316 297 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 CLDN16Q9Y5I7 305 aa9.68□□□□□ -0.86
NR1I3-222ENST00000506018 CRYBG3Q68DQ2 2970 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 ENO4A6NNW6 628 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 E9PLN8 166 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 STX16-NPEPL1H3BU86 382 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 WWP2O00308 870 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 FOXE1O00358 373 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PLPP1O14494 284 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 STX16O14662 325 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 OR10H2O60403 315 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 CDC40O60508 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 P04436 131 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 HTR1EP28566 365 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 GCAP28676 217 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PTGS2P35354 604 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 SOX3P41225 446 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 HK2P52789 917 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 GPR85P60893 370 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 RPS13P62277 151 aaKnown RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 IFT88Q13099 833 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 TECRLQ5HYJ1 363 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 NDUFAF5Q5TEU4 345 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 TMEM211Q6ICI0 200 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 ARHGAP11AQ6P4F7 1023 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 SLC29A4Q7RTT9 530 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PAGE2Q7Z2X7 111 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 SLC22A16Q86VW1 577 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF227Q86WZ6 799 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 DND1Q8IYX4 353 aaKnown RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PTGR2Q8N8N7 351 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 L3MBTL4Q8NA19 623 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 ZFP62Q8NB50 900 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 GOLM1Q8NBJ4 401 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 C16orf52Q8NHV5 167 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 NUBPLQ8TB37 319 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 AGAP11Q8TF27 550 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PHF10Q8WUB8 498 aaKnown RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 SGCZQ96LD1 299 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 RASL10BQ96S79 203 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 SERPINI1Q99574 410 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 VKORC1Q9BQB6 163 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 NOL11Q9H8H0 719 aaKnown RBP9.67□□□□□ -0.86
NR1I3-222ENST00000506018 SACM1LQ9NTJ5 587 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 DCDC2Q9UHG0 476 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PPT2Q9UMR5 302 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF407Q9C0G0 2248 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 TEX15Q9BXT5 2789 aa9.67□□□□□ -0.86
NR1I3-222ENST00000506018 PHF3Q92576 2039 aaKnown RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 MYOCOSA0A1B0GUC4 107 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms