RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CA5BQ9Y2D0 317 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PCDHGB1Q9Y5G3 927 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 NUP214P35658 2090 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 F5P12259 2224 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 MYO9BQ13459 2157 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 H3BQ06 376 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZSCAN9O15535 394 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 MFN2O95140 757 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 IFI6P09912 130 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 NR2F6P10588 404 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 DCKP27707 260 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 CD6P30203 668 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 UBE2IP63279 158 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 TDGQ13569 410 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PROX2Q3B8N5 592 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 TNFAIP8L2Q6P589 184 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 ABHD13Q7L211 337 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 TSEN54Q7Z6J9 526 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PARP8Q8N3A8 854 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 OR13H1Q8NG92 308 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 DOK1Q99704 481 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 WSB2Q9NYS7 404 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 ATG4BQ9Y4P1 393 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PRAMEF33A0A0G2JMD5 474 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 SPTY2D1-AS1A0A0U1RR47 76 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 EMC8O43402 210 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 OXSR1O95747 527 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 ANGPTL1O95841 491 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 SMIM10L1P0DMW3 83 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CD247P20963 164 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 LIMS1P48059 325 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 RAPSNQ13702 412 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 MEP1AQ16819 746 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 VN1R4Q7Z5H5 301 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 AMER3Q8N944 861 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 IPCEF1Q8WWN9 437 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 SMIM10Q96HG1 83 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 ZNF354BQ96LW1 612 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CHRDQ9H2X0 955 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CD93Q9NPY3 652 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CPNE7Q9UBL6 633 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 MRPS17Q9Y2R5 130 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 HCN4Q9Y3Q4 1203 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 TESMINQ9Y4I5 508 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 LAMA2P24043 3122 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CCDC85CA6NKD9 419 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 TRMUO75648 421 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLITRK5O94991 958 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 AGR2O95994 175 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 MATN1P21941 496 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 IGFBP4P22692 258 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 TLX1P31314 330 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 KCNJ5P48544 419 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CLK3P49761 638 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 GPR18Q14330 331 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 RAB39AQ14964 217 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CTU2Q2VPK5 515 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 COLEC12Q5KU26 742 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CWF19L1Q69YN2 538 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 FIGLAQ6QHK4 219 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 GALNT5Q7Z7M9 940 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 LGI4Q8N135 537 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 DEPDC4Q8N2C3 294 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 LINC00471Q8N535 108 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 CCL4L1Q8NHW4 92 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 TOE1Q96GM8 510 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR2A5Q96R48 311 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 BARD1Q99728 777 aaKnown RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR51I1Q9H343 314 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 C6orf106Q9H6K1 298 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 TRIM45Q9H8W5 580 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 TIMMDC1Q9NPL8 285 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 LIPT1Q9Y234 373 aa16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 GPC6Q9Y625 555 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC11-204ENST00000505676 LRP4O75096 1905 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 ENO4A6NNW6 628 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC28A2O43868 658 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 PRAMEF10O60809 474 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 MITFO75030 526 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 CCNB2O95067 398 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 GADD45GO95257 159 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 ITIH1P19827 911 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 CERS1P27544 350 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 TMBIM6P55061 237 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 TNFRSF17Q02223 184 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 MVKQ03426 396 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR13F1Q8NGS4 319 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 SUN3Q8TAQ9 357 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 UTP15Q8TED0 518 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 PHF10Q8WUB8 498 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 APOBEC4Q8WW27 367 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 RERGQ96A58 199 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 NODALQ96S42 347 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 ZFYVE21Q9BQ24 234 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 LYRM4Q9HD34 91 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 C5AR2Q9P296 337 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 PILRAQ9UKJ1 303 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 FBXW2Q9UKT8 454 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 SPACA6W5XKT8 324 aa16.32■□□□□ 0.2
TRAPPC11-204ENST00000505676 PLXND1Q9Y4D7 1925 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms