RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ARHGAP40Q5TG30 622 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 IL23RQ5VWK5 629 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 ACSM2BQ68CK6 577 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 RIPOR1Q6ZS17 1223 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 OR14A16Q8NHC5 309 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 NUBPLQ8TB37 319 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 KCNE4Q8WWG9 221 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 MIEF2Q96C03 454 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 FRMD6Q96NE9 622 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 CENPKQ9BS16 269 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 CXorf21Q9HAI6 301 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 SLC35C2Q9NQQ7 365 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 HCN3Q9P1Z3 774 aa7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 IFT80Q9P2H3 777 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 PCDHGA9Q9Y5G4 932 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 EP300Q09472 2414 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-208ENST00000505065 STATHP02808 62 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PLA2G16P53816 162 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 DLX5P56178 289 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 HEPACAMQ14CZ8 416 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 TTC19Q6DKK2 380 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MTERF4Q7Z6M4 381 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MSRB3Q8IXL7 192 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 FBXL20Q96IG2 436 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 BTBD9Q96Q07 612 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 CCNL2Q96S94 520 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 GPATCH1Q9BRR8 931 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 TUBB6Q9BUF5 446 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 FAM120CQ9NX05 1096 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PTGFRNQ9P2B2 879 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 POLR3HQ9Y535 204 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PCDHGB7Q9Y5F8 929 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 NBEAQ8NFP9 2946 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 NPPAP01160 153 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 BUD31P41223 144 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 RPL38P63173 70 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MC1RQ01726 317 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 FOLH1Q04609 750 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 SRSF11Q05519 484 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PDCD2Q16342 344 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 C1orf189Q5VU69 101 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 SAXO2Q658L1 398 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 SCIMPQ6UWF3 145 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 C6orf89Q6UWU4 347 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 R3HCC1LQ7Z5L2 792 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 OR1N1Q8NGS0 311 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 DNAJB8Q8NHS0 232 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 CATSPER2Q96P56 530 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 HBEGFQ99075 208 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 TRIM55Q9BYV6 548 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PAIP1Q9H074 479 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 GLIPR2Q9H4G4 154 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PCDHGB6Q9Y5F9 930 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MRPS18BQ9Y676 258 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 KNL1Q8NG31 2342 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PIEZO1Q92508 2521 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 NR6A1Q15406 480 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 GALNTL6Q49A17 601 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 HEPHL1Q6MZM0 1159 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 ZCCHC12Q6PEW1 402 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 DLEU7Q6UYE1 221 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 LSM14AQ8ND56 463 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PEX11GQ96HA9 241 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MESP1Q9BRJ9 268 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MAP10Q9P2G4 905 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PRDM4Q9UKN5 801 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 C19orf53Q9UNZ5 99 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 MAU2Q9Y6X3 613 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 SEC22BO75396 215 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PRKRAO75569 313 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 CT62P0C5K7 136 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 TCN2P20062 427 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 FOLR3P41439 243 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 SLC26A5P58743 744 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 OLR1P78380 273 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PTGR1Q14914 329 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 ZNF227Q86WZ6 799 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 HPS6Q86YV9 775 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 TP53INP1Q96A56 240 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 NAF1Q96HR8 494 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 VSTM2LQ96N03 204 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 FAIM2Q9BWQ8 316 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 PRTFDC1Q9NRG1 225 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 GPATCH2Q9NW75 528 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 CROCCQ5TZA2 2017 aa7.73□□□□□ -1.17
CDC42SE2-208ENST00000505065 DSPPQ9NZW4 1301 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 C9J4A7 227 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 FBP2O00757 339 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 EIF2S1P05198 315 aaKnown RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 IL6P05231 212 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 CSNK2A2P19784 350 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 EMDP50402 254 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 RAP1GDS1P52306 607 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 KRT72Q14CN4 511 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 TGIF1Q15583 401 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 MAPK11Q15759 364 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 EXT1Q16394 746 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 SLC15A4Q8N697 577 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 TSLPQ969D9 159 aa7.72□□□□□ -1.17
CDC42SE2-208ENST00000505065 SYNDIG1Q9H7V2 258 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms