RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MS4A12	Q9NXJ0	267 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NOP53	Q9NZM5	478 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NTM	Q9P121	344 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	IFT80	Q9P2H3	777 aa	Predicted RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NDOR1	Q9UHB4	597 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PHF11	Q9UIL8	331 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	DCTN4	Q9UJW0	460 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	KCND3	Q9UK17	655 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NXT1	Q9UKK6	140 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	FBXW2	Q9UKT8	454 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	RAX	Q9Y2V3	346 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MMACHC	Q9Y4U1	282 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	COPG1	Q9Y678	874 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TLN1	Q9Y490	2541 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ATRX	P46100	2492 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PIEZO2	Q9H5I5	2752 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788		A0A088AWK7	358 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TRBV5-3	A0A0A0MS03	114 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	BLACE	A4D250	179 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CAPN14	A8MX76	684 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788		E9PBE3	544 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788		K7ENP7	123 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ADAM10	O14672	748 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	SCAMP2	O15127	329 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	POLR3G	O15318	223 aa	Predicted RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NKX2-8	O15522	239 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	KLHL41	O60662	606 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PRMT3	O60678	531 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF354A	O60765	605 aa	Predicted RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ALOX12B	O75342	701 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	VPS4B	O75351	444 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CRCP	O75575	148 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	GPR75	O95800	540 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	DDAH2	O95865	285 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCNYL3	P0C7X3	344 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NR2F6	P10588	404 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	LAMP1	P11279	417 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF10	P21506	573 aa	Predicted RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	AGXT	P21549	392 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CPN2	P22792	545 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	GALNS	P34059	522 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	RAP1GDS1	P52306	607 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MVD	P53602	400 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	SOX8	P57073	446 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TGM3	Q08188	693 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	FUT7	Q11130	342 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MLC1	Q15049	377 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TLR1	Q15399	786 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TERF2	Q15554	542 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	IMPG1	Q17R60	797 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PDCD4	Q53EL6	469 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF628	Q5EBL2	1059 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	SPDYA	Q5MJ70	313 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR52E8	Q6IFG1	317 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ANKRD26P1	Q6NSI1	321 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	H3F3C	Q6NXT2	135 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	INO80C	Q6PI98	192 aa	Predicted RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PAOX	Q6QHF9	649 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	BLOC1S3	Q6QNY0	202 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PCSK4	Q6UW60	755 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	SPATA19	Q7Z5L4	167 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MRGPRE	Q86SM8	312 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TREML1	Q86YW5	311 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TICAM1	Q8IUC6	712 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR4N5	Q8IXE1	308 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF321P	Q8N8H1	164 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ANKS4B	Q8N8V4	417 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR7A2P	Q8NGA2	310 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ADAMTS18	Q8TE60	1221 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF721	Q8TF20	911 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	KCNE4	Q8WWG9	221 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	STARD8	Q92502	1023 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	TANK	Q92844	425 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	C8orf44	Q96CB5	159 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MTERF3	Q96E29	417 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MARK4	Q96L34	752 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCT8L2	Q96SF2	557 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCDC106	Q9BWC9	280 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NMUR2	Q9GZQ4	415 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF700	Q9H0M5	742 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	GLIPR2	Q9H4G4	154 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	REEP4	Q9H6H4	257 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	CXorf21	Q9HAI6	301 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	SAR1A	Q9NR31	198 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PRTFDC1	Q9NRG1	225 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	SEMA3G	Q9NS98	782 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	RIC8B	Q9NVN3	520 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	GPATCH2	Q9NW75	528 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	NMRK1	Q9NWW6	199 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	AHSP	Q9NZD4	102 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAT2B	Q9NZL9	334 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	C3orf18	Q9UK00	162 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	MKL2	Q9ULH7	1088 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	PTRH2	Q9Y3E5	179 aa	Known RBP	4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	GMEB1	Q9Y692	573 aa		4.62	□□□□□ -1.67
LMNB1-208	ENST00000504788	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.61	□□□□□ -1.67
LMNB1-208	ENST00000504788	IGHV3-20	A0A0C4DH32	117 aa		4.61	□□□□□ -1.67
LMNB1-208	ENST00000504788		A0A0G2JND7	137 aa		4.61	□□□□□ -1.67
LMNB1-208	ENST00000504788	MYOCOS	A0A1B0GUC4	107 aa		4.61	□□□□□ -1.67

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