RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 ABCA4P78363 2273 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 ARHGAP21Q5T5U3 1957 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 ANKHD1Q8IWZ3 2542 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 TUBAL3A6NHL2 446 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 HSPB2A8KAH6 182 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 C17orf105B2RV13 164 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 SUSD5O60279 629 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 H2AFYO75367 372 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 INHBBP09529 407 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 CXCR5P32302 372 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 PIGAP37287 484 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 ASCL1P50553 236 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 HNRNPFP52597 415 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 PGGT1BP53609 377 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 TIAL1Q01085 375 aaKnown RBP eCLIP8.36□□□□□ -1.07
DHFR-202ENST00000504396 TBL3Q12788 808 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 RUNX2Q13950 521 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 HSPB2Q16082 182 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 HYAL4Q2M3T9 481 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 RIPPLY2Q5TAB7 128 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 PRAMEF20Q5VT98 475 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 TRIM40Q6P9F5 258 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 OPN5Q6U736 354 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 ZNF595Q8IYB9 648 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 LRRN4CLQ8ND94 238 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 TRIM58Q8NG06 486 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 OR8K3Q8NH51 312 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 OR14A16Q8NHC5 309 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 FAM222BQ8WU58 562 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 PDLIM5Q96HC4 596 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 C18orf12Q96KH6 178 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 SIGLEC10Q96LC7 697 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 SGCZQ96LD1 299 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 CSF3RQ99062 836 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 YIPF4Q9BSR8 244 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 NAT9Q9BTE0 207 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 PITHD1Q9GZP4 211 aaPredicted RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 SLC6A15Q9H2J7 730 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 SPRR3Q9UBC9 169 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 STOML1Q9UBI4 398 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 MTRF1LQ9UGC7 380 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 BOKQ9UMX3 212 aaPredicted RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 SLC22A14Q9Y267 594 aa8.36□□□□□ -1.07
DHFR-202ENST00000504396 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.36□□□□□ -1.07
DHFR-202ENST00000504396 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 C15orf38-AP3S2A0A0A6YYH1 394 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 LOC100289279A0A1B0GTE1 492 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ANKDD1BA6NHY2 528 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 EEF1E1-BLOC1S5C9J1V9 151 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 CLGNO14967 610 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 EEF1E1O43324 174 aaKnown RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 HCN1O60741 890 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 WDR47O94967 919 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ATE1O95260 518 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 CCDC175P0C221 793 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 PGAM1P18669 254 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 CERS1P27544 350 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 HNRNPH1P31943 449 aaKnown RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 TRPC1P48995 793 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 HNMTP50135 292 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 WNT3P56703 355 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 RNF4P78317 190 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 CDKL1Q00532 357 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ID2Q02363 134 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ASPHQ12797 758 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 SLBPQ14493 270 aaKnown RBP eCLIP8.35□□□□□ -1.07
DHFR-202ENST00000504396 CRYMQ14894 314 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 POU4F3Q15319 338 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 PCBP2Q15366 365 aaKnown RBP eCLIP8.35□□□□□ -1.07
DHFR-202ENST00000504396 TMEM198Q66K66 360 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ANKRD34AQ69YU3 496 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 FDX2Q6P4F2 183 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 FRA10AC1Q70Z53 315 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 LRRC8AQ8IWT6 810 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 CNTN4Q8IWV2 1026 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 KLHDC8AQ8IYD2 350 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 KRT78Q8N1N4 520 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 FBXW8Q8N3Y1 598 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ZNF321PQ8N8H1 164 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 MORN4Q8NDC4 146 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 OR5L2Q8NGL0 311 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 SLC22A8Q8TCC7 542 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 SLC2A12Q8TD20 617 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 RNASE6Q93091 150 aaKnown RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 MS4A6EQ96DS6 147 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ALOXE3Q9BYJ1 711 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 REXO4Q9GZR2 422 aaKnown RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 SEMA4BQ9NPR2 832 aaPredicted RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 LZTFL1Q9NQ48 299 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 TRMT1Q9NXH9 659 aaKnown RBP8.35□□□□□ -1.07
DHFR-202ENST00000504396 SLC17A6Q9P2U8 582 aa8.35□□□□□ -1.07
DHFR-202ENST00000504396 ATG4BQ9Y4P1 393 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms