RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GRXCR2A6NFK2 248 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 SMAD6O43541 496 aaKnown RBP7.26□□□□□ -1.25
NEDD9-208ENST00000504387 SSNA1O43805 119 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 BCHEP06276 602 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 PRPS2P11908 318 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 PRPS1L1P21108 318 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 CPN2P22792 545 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 CCR7P32248 378 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 PRKAG1P54619 331 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 CDK6Q00534 326 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 NCF4Q15080 339 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 ERICH5Q6P6B1 374 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 TEX261Q6UWH6 196 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 TAS1R1Q7RTX1 841 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 CNTRLQ7Z7A1 2325 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF655Q8N720 491 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-208ENST00000504387 FAM46DQ8NEK8 389 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 AUTS2Q8WXX7 1259 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 SLC25A46Q96AG3 418 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 PSKH2Q96QS6 385 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 SPRTNQ9H040 489 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-208ENST00000504387 SGK2Q9HBY8 427 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 TRPM5Q9NZQ8 1165 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 VPS29Q9UBQ0 182 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 SEC14L4Q9UDX3 406 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 ABT1Q9ULW3 272 aaKnown RBP7.26□□□□□ -1.25
NEDD9-208ENST00000504387 KCNE2Q9Y6J6 123 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 U3KQ87 197 aa7.26□□□□□ -1.25
NEDD9-208ENST00000504387 A0A075B6Q4 140 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SMAD9O15198 467 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 PDPK1O15530 556 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 FRS3O43559 492 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ALPPP05187 535 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CD22P20273 847 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ITGALP20701 1170 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CCND3P30281 292 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SLC16A1P53985 500 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 LIM2P55344 173 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 OC90Q02509 493 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 NFATC2Q13469 925 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 EXOSC2Q13868 293 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TMCO2Q7Z6W1 182 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF467Q7Z7K2 595 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TRIM69Q86WT6 500 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SYNPOQ8N3V7 929 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 LSM14AQ8ND56 463 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 VPS37AQ8NEZ2 397 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 OR4F15Q8NGB8 312 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ZFPM2Q8WW38 1151 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 C11orf24Q96F05 449 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 C1orf74Q96LT6 269 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SLC6A18Q96N87 628 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 NRTNQ99748 197 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 MGME1Q9BQP7 344 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SAV1Q9H4B6 383 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RBFOX1Q9NWB1 397 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 FKBP14Q9NWM8 211 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ING4Q9UNL4 249 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ZFR2Q9UPR6 939 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CLCA2Q9UQC9 943 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TCRBV16S1A1N1A0A5B0 115 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 HEPACAM2A8MVW5 462 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 M0R3H8 397 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ADAM12O43184 909 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SGTAO43765 313 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ACSL4O60488 711 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SCN2BO60939 215 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RFPL3O75679 317 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 LALBAP00709 142 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 EPOP01588 193 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 PREPP48147 710 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 PER3P56645 1201 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RPS13P62277 151 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SMAD3P84022 425 aaKnown RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 HEPACAMQ14CZ8 416 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 KLHL22Q53GT1 634 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ACSM5Q6NUN0 579 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ARSKQ6UWY0 536 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CEACAM20Q6UY09 585 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 WASH2PQ6VEQ5 465 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF767PQ75MW2 155 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 NPAS3Q8IXF0 933 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 RBFAQ8N0V3 343 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CPA6Q8N4T0 437 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TRPV1Q8NER1 839 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 OR11H7Q8NGC8 314 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 COQ8AQ8NI60 647 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TESCQ96BS2 214 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SENP5Q96HI0 755 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SYT17Q9BSW7 474 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 P2RY12Q9H244 342 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 CLEC4MQ9H2X3 399 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-208ENST00000504387 TMEM245Q9H330 911 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 EGLN3Q9H6Z9 239 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 MVB12BQ9H7P6 319 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 PLCXD1Q9NUJ7 323 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
NEDD9-208ENST00000504387 SCML2Q9UQR0 700 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms