RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TMEM211Q6ICI0 200 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 ARHGAP11AQ6P4F7 1023 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 RTL4Q6ZR62 310 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 MILR1Q7Z6M3 343 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 SLC22A16Q86VW1 577 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 ZNF321PQ8N8H1 164 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 PTGR2Q8N8N7 351 aaPredicted RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 OR52N2Q8NGI0 321 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 RIT1Q92963 219 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 SERPINI1Q99574 410 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 VKORC1Q9BQB6 163 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 MRPL57Q9BQC6 102 aaKnown RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 PELOQ9BRX2 385 aaKnown RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 NTMT1Q9BV86 223 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 ZNF358Q9NW07 568 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 LYARQ9NX58 379 aaKnown RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 CACNA1CQ13936 2221 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 TACC2O95359 2948 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 A0A1W2PR48 441 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 STX16-NPEPL1H3BU86 382 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 C19orf84I3L1E1 186 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 KIF2AO00139 706 aaPredicted RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 ACOT7O00154 380 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 OR7A17O14581 309 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 STX16O14662 325 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 CLDN14O95500 239 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 TPOP07202 933 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 SNRPAP09012 282 aaKnown RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 BSGP35613 385 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 PLIN5Q00G26 463 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 TNFRSF17Q02223 184 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 TBL3Q12788 808 aaKnown RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 ASPHQ12797 758 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 IFT88Q13099 833 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 ZNF267Q14586 743 aaPredicted RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 SLC10A1Q14973 349 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 CDSNQ15517 529 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 C10orf62Q5T681 223 aaPredicted RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 NDUFAF5Q5TEU4 345 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 C3P1Q6ZMU1 363 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 FAM47EQ6ZV65 393 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 ST13P4Q8IZP2 240 aaPredicted RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 SLC15A4Q8N697 577 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 GOLM1Q8NBJ4 401 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 NOA1Q8NC60 698 aaKnown RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 OR2M7Q8NG81 312 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 NUBPLQ8TB37 319 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 FAM57AQ8TBR7 257 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 WDR20Q8TBZ3 569 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 SLC22A8Q8TCC7 542 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 CA5BP1Q8WTZ4 195 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 PAFAH2Q99487 392 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 FAM173AQ9BQD7 235 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 TRIM8Q9BZR9 551 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 SACM1LQ9NTJ5 587 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
MED28-203ENST00000503945 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 ZNF180Q9UJW8 692 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 ASB4Q9Y574 426 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
MED28-203ENST00000503945 HIVEP1P15822 2718 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 A0A0A6YYD5 115 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 GLOD5A6NK44 160 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 WASHC1A8K0Z3 465 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 TRIM49D1C9J1S8 452 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 GUCY1B2O75343 617 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 EEDO75530 441 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 KLK1P06870 262 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 SLC35E2P0CK97 266 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 PIK3R1P27986 724 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 SERPINB3P29508 390 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 GALNSP34059 522 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 HNRNPH2P55795 449 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 GXYLT1Q4G148 440 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 CMPK2Q5EBM0 449 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 TECRLQ5HYJ1 363 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 TEX35Q5T0J7 233 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 CCNYL2Q5T2Q4 361 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 FRG2Q64ET8 278 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 MRM1Q6IN84 353 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 GK5Q6ZS86 529 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 SLC29A4Q7RTT9 530 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 PAGE2Q7Z2X7 111 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 NUDT13Q86X67 352 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 CHERPQ8IWX8 916 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 IFT20Q8IY31 132 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 OR52B6Q8NGF0 335 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 KIF18AQ8NI77 898 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 UHMK1Q8TAS1 419 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 PHF10Q8WUB8 498 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 FBXL20Q96IG2 436 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 FRG2BQ96QU4 278 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 CNPPD1Q9BV87 410 aa11.06□□□□□ -0.64
MED28-203ENST00000503945 MRPL46Q9H2W6 279 aaKnown RBP11.06□□□□□ -0.64
MED28-203ENST00000503945 ELOVL6Q9H5J4 265 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms