RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LIPJQ5W064 366 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 DND1Q8IYX4 353 aaKnown RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC22A15Q8IZD6 547 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 ADAD2Q8NCV1 583 aaKnown RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 GMCL1P1Q8NEA9 526 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 IPMKQ8NFU5 416 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 SMAP2Q8WU79 429 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 P3H4Q92791 437 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 PCED1BQ96HM7 432 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 EPYCQ99645 322 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 JPH2Q9BR39 696 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 CARD6Q9BX69 1037 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 MED17Q9NVC6 651 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 TMOD2Q9NZR1 351 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 DIMT1Q9UNQ2 313 aaKnown RBP4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 WDR37Q9Y2I8 494 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 DOCK7Q96N67 2140 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 TRAPPC8Q9Y2L5 1435 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 FYCO1Q9BQS8 1478 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 SAMD9LQ8IVG5 1584 aa4.61□□□□□ -1.67
HMGB1P3-201ENST00000502802 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 FAM230AA0A1W2PPH8 454 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 SH3PXD2BA1X283 911 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 PMS2P5A8MQ11 134 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 ANHXE9PGG2 379 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 BLOC1S5-TXNDC5H3BN57 136 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 SURF4O15260 269 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 SIGLEC5O15389 551 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 LMX1BO60663 402 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 ANGPTL1O95841 491 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 CALCAP01258 141 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 CD48P09326 243 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 TSPY4P0CV99 314 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 TSPY10P0CW01 314 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 PRSS56P0CW18 603 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 C4BPBP20851 252 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 ADSSP30520 456 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 MAP2K2P36507 400 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 FHITP49789 147 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 PAX9P55771 341 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 TRA2BP62995 288 aaKnown RBP4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC25A24Q6NUK1 477 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 Q71RC1 249 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 MCM10Q7L590 875 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 CHMP1BQ7LBR1 199 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 PTAR1Q7Z6K3 402 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 HOGA1Q86XE5 327 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 WDR49Q8IV35 697 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 CERS5Q8N5B7 392 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 BCORP1Q8N888 145 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR6S1Q8NH40 331 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 GOLGA5Q8TBA6 731 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 MAPK15Q8TD08 544 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 CHPT1Q8WUD6 406 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 NCLNQ969V3 563 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 AZIN2Q96A70 460 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 DTNBP1Q96EV8 351 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 FAM218AQ96MZ4 157 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 ACTR8Q9H981 624 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 UBE2TQ9NPD8 197 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 GDF3Q9NR23 364 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 LHX3Q9UBR4 397 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 TBK1Q9UHD2 729 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 ATG4BQ9Y4P1 393 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZMYM6O95789 1325 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 KIF7Q2M1P5 1343 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 PTPRUQ92729 1446 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 MLH3Q9UHC1 1453 aa4.6□□□□□ -1.67
HMGB1P3-201ENST00000502802 A0A1B0GWJ7 208 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 A0A1W2PR80 420 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 MROH2AA6NES4 1674 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 GLTPD2A6NH11 291 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 SHISA7A6NL88 538 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 ANGPT2O15123 496 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CHADO15335 359 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 ABCC4O15439 1325 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CSDE1O75534 798 aaKnown RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CYP2F1P24903 491 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 PRDX2P32119 198 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 AGLP35573 1532 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 TIMP3P35625 211 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 TRPC1P48995 793 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 HSF2Q03933 536 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 ELP6Q0PNE2 266 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 FUT7Q11130 342 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 RAPSNQ13702 412 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 FFAR4Q5NUL3 377 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 STPG1Q5TH74 334 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 C1orf189Q5VU69 101 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 FAM53AQ6NSI3 398 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CFAP65Q6ZU64 1925 aaKnown RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC22A16Q86VW1 577 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF573Q86YE8 665 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 MISPQ8IVT2 679 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 APLFQ8IW19 511 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 TBC1D21Q8IYX1 336 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 PARP8Q8N3A8 854 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 RAB42Q8N4Z0 105 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms