RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 WDR34Q96EX3 536 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 PTCD3Q96EY7 689 aaKnown RBP13.49□□□□□ -0.25
TRAF4-212ENST00000498540 PBKQ96KB5 322 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 DGAT2Q96PD7 388 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 TIMP4Q99727 224 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 DOHHQ9BU89 302 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 CAPS2Q9BXY5 557 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 MS4A8Q9BY19 250 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 ROGDIQ9GZN7 287 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 WWOXQ9NZC7 414 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 CNIH4Q9P003 139 aa13.49□□□□□ -0.25
TRAF4-212ENST00000498540 CNOT11Q9UKZ1 510 aaKnown RBP13.49□□□□□ -0.25
TRAF4-212ENST00000498540 JMJD1CQ15652 2540 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 A0A1W2PPR1 153 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 CLCA1A8K7I4 914 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 CLGNO14967 610 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 TRIM3O75382 744 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-212ENST00000498540 SCELO95171 688 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 IL2RAP01589 272 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 C1QAP02745 245 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 EPORP19235 508 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 CD53P19397 219 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 HIST1H1TP22492 207 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-212ENST00000498540 CPN2P22792 545 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 GGT5P36269 586 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 MSH2P43246 934 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 HSPA7P48741 367 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 TBL3Q12788 808 aaKnown RBP13.48□□□□□ -0.25
TRAF4-212ENST00000498540 POU4F3Q15319 338 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 PCBP2Q15366 365 aaKnown RBP eCLIP13.48□□□□□ -0.254e-7■■■□□ 17.9
TRAF4-212ENST00000498540 TAOK1Q7L7X3 1001 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 SPATA6LQ8N4H0 392 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 HSPBAP1Q96EW2 488 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 FBXL20Q96IG2 436 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 ZNF597Q96LX8 424 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 GAL3ST4Q96RP7 486 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 TBCDQ9BTW9 1192 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 SORBS1Q9BX66 1292 aaKnown RBP13.48□□□□□ -0.25
TRAF4-212ENST00000498540 PRDM14Q9GZV8 571 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 EPB41L4BQ9H329 900 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 NEUROD4Q9HD90 331 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 SPACA6W5XKT8 324 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 EXPH5Q8NEV8 1989 aa13.48□□□□□ -0.25
TRAF4-212ENST00000498540 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 EEF1E1-BLOC1S5C9J1V9 151 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 SAP18O00422 153 aaKnown RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 EEF1E1O43324 174 aaKnown RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 PRKRAO75569 313 aaKnown RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 HEXAP06865 529 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 SSR2P43308 183 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 HERVK_113P63132 956 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 ERVK-8P63133 956 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 PLIN5Q00G26 463 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 NTRK2Q16620 822 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 PDK4Q16654 411 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 DCST1Q5T197 706 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 NSUN5P2Q63ZY6 315 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 BICRALQ6AI39 1079 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 PRIMA1Q86XR5 153 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 KIF18BQ86Y91 864 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 DND1Q8IYX4 353 aaKnown RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 BBOF1Q8ND07 529 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 SRFBP1Q8NEF9 429 aaKnown RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 ZNF473Q8WTR7 871 aaKnown RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 NAP1L3Q99457 506 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-212ENST00000498540 EFCAB11Q9BUY7 163 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 ERVK-6Q9BXR3 956 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 WWTR1Q9GZV5 400 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 CAMK2AQ9UQM7 478 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 ERVK-19Q9WJR5 959 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 SLC6A5Q9Y345 797 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 TEX264Q9Y6I9 313 aa13.47□□□□□ -0.25
TRAF4-212ENST00000498540 STK16O75716 305 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 TRAPPC6AO75865 159 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 WISP3O95389 354 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-212ENST00000498540 TGFB1P01137 390 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 HRGP04196 525 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 IVDP26440 423 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 SERPINB3P29508 390 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 NKX6-1P78426 367 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-212ENST00000498540 SORDQ00796 357 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 MGAT5Q09328 741 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 CHIT1Q13231 466 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 EBPQ15125 230 aaKnown RBP13.46□□□□□ -0.25
TRAF4-212ENST00000498540 AP5B1Q2VPB7 878 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 C18orf63Q68DL7 685 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 TMEM64Q6YI46 380 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 SLC29A4Q7RTT9 530 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 ANKMY2Q8IV38 441 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 PM20D2Q8IYS1 436 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 VWA5B2Q8N398 1253 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 TCAIMQ8N3R3 496 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 DIO2Q92813 273 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 RBM18Q96H35 190 aaKnown RBP13.46□□□□□ -0.25
TRAF4-212ENST00000498540 ART5Q96L15 291 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 TRIB1Q96RU8 372 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 KRT12Q99456 494 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 YIPF4Q9BSR8 244 aa13.46□□□□□ -0.25
TRAF4-212ENST00000498540 DERL2Q9GZP9 239 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms