RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 WDR83Q9BRX9 315 aaKnown RBP12.78□□□□□ -0.36
CCDC58-207ENST00000498466 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
CCDC58-207ENST00000498466 ROGDIQ9GZN7 287 aa12.78□□□□□ -0.36
CCDC58-207ENST00000498466 PITHD1Q9GZP4 211 aaPredicted RBP12.78□□□□□ -0.36
CCDC58-207ENST00000498466 PRDM14Q9GZV8 571 aa12.78□□□□□ -0.36
CCDC58-207ENST00000498466 CNOT11Q9UKZ1 510 aaKnown RBP12.78□□□□□ -0.36
CCDC58-207ENST00000498466 FBN1P35555 2871 aaKnown RBP12.77□□□□□ -0.36
CCDC58-207ENST00000498466 A0A1W2PPR1 153 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 NCF1BA6NI72 391 aaPredicted RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 NCF1CA8MVU1 366 aaPredicted RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 HRKO00198 91 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 CLGNO14967 610 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 FGF17O60258 216 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 SMPD2O60906 423 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ERN1O75460 977 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ACSL3O95573 720 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 IGKV3-11P04433 115 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 NCF1P14598 390 aaPredicted RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 CPN2P22792 545 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 RPL21P46778 160 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 TOMM20Q15388 145 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 TSNQ15631 228 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 CCDC137Q6PK04 289 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ZNF793Q6ZN11 406 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 SLC29A4Q7RTT9 530 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 NKAPQ8N5F7 415 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ACOT4Q8N9L9 421 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 SIMC1Q8NDZ2 872 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ANKRD7Q92527 254 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ZNF592Q92610 1267 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 DIO2Q92813 273 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 RHBDF1Q96CC6 855 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 RBM18Q96H35 190 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 ART5Q96L15 291 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 Q96MF0 132 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 NAT9Q9BTE0 207 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 RBM24Q9BX46 236 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 GPRC5BQ9NZH0 403 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 JKAMPQ9P055 326 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
CCDC58-207ENST00000498466 SLC6A5Q9Y345 797 aa12.77□□□□□ -0.37
CCDC58-207ENST00000498466 IQANK1A0A1B0GTG1 560 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 SH3D21A4FU49 640 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 MBD3L4A6NDZ8 208 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 MBD3L3A6NE82 208 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 MBD3L5A6NJ08 208 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 INAFM1C9JVW0 142 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 RTCAO00442 366 aaKnown RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 CASKO14936 926 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 TRIM3O75382 744 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 IL18BPO95998 194 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 TMIGD3P0DMS9 266 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 ATP5A1P25705 553 aaKnown RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 CPA2P48052 419 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 PLIN5Q00G26 463 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 ZNF460Q14592 562 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 NTRK2Q16620 822 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 TBCELQ5QJ74 424 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 VASNQ6EMK4 673 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 DGAT2L6Q6ZPD8 337 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 UBE3DQ7Z6J8 389 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 LUZP2Q86TE4 346 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 ADAMTSL2Q86TH1 951 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 LRRC75A-AS1Q8N1F1 130 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 SPC24Q8NBT2 197 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 MBD3L2Q8NHZ7 208 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 DOK4Q8TEW6 326 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 SMPDL3BQ92485 455 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 ISL2Q96A47 359 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 FBXL20Q96IG2 436 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 BDH2Q9BUT1 245 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 EHD1Q9H4M9 534 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 GALNT8Q9NY28 637 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 CTNNAL1Q9UBT7 734 aa12.76□□□□□ -0.37
CCDC58-207ENST00000498466 ZNF490Q9ULM2 529 aaPredicted RBP12.76□□□□□ -0.37
CCDC58-207ENST00000498466 NCKAP5O14513 1909 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 HPNP05981 417 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 BMP7P18075 431 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 HIST1H1TP22492 207 aaPredicted RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 MASP1P48740 699 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 CDK9P50750 372 aaKnown RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 HERVK_113P63132 956 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 ERVK-8P63133 956 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 DOC2AQ14183 400 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 RCAN2Q14206 197 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 AP5B1Q2VPB7 878 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 MSS51Q4VC12 460 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 RNASEH2BQ5TBB1 312 aaKnown RBP12.75□□□□□ -0.37
CCDC58-207ENST00000498466 RNF111Q6ZNA4 994 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 TAGAPQ8N103 731 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 SNX31Q8N9S9 440 aa12.75□□□□□ -0.37
CCDC58-207ENST00000498466 C9orf106Q8NAJ2 232 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms