RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 FIGNL2A6NMB9 653 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 KIR3DP1A8MWS1 328 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 FOXO6A8MYZ6 492 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 H0YIV9 168 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 PLPP1O14494 284 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 OR10H2O60403 315 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 GLSO94925 669 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 KLHL2O95198 593 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 C2P06681 752 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 MTHFD2P13995 350 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 ALOX15P16050 662 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 TYK2P29597 1187 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 ARL1P40616 181 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 RPS13P62277 151 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 IRF9Q00978 393 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 GUCY2DQ02846 1103 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 FOLH1Q04609 750 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 CKAP4Q07065 602 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 PMPCAQ10713 525 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 GTF2H2Q13888 395 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 SLC10A1Q14973 349 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 TRADDQ15628 312 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 GXYLT1Q4G148 440 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 SLC22A10Q63ZE4 541 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 C18orf63Q68DL7 685 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 C8orf74Q6P047 294 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 GTF2H2CQ6P1K8 395 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 SLC29A4Q7RTT9 530 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 DND1Q8IYX4 353 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 CENPLQ8N0S6 344 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 LILRB4Q8NHJ6 448 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 PPWD1Q96BP3 646 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 FBXL20Q96IG2 436 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 SMC6Q96SB8 1091 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 CNPPD1Q9BV87 410 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 LDAHQ9H6V9 325 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 EXO5Q9H790 373 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 KCNJ16Q9NPI9 418 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 SNX15Q9NRS6 342 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 RNF6Q9Y252 685 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 ATG4BQ9Y4P1 393 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 HRH3Q9Y5N1 445 aa10.87□□□□□ -0.67
NUDCD3-211ENST00000497978 ATP6AP2A0A1C7CYW4 349 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 FAM90A27PA6NNH2 459 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 PROM1O43490 865 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SUSD5O60279 629 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ATP6AP2O75787 350 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 GPR75O95800 540 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 IGHG3P01860 377 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 IGKV3-11P04433 115 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 CCL3P10147 92 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 NR2F6P10588 404 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ACVR2AP27037 513 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SERPINB3P29508 390 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 MAGEA5P43359 124 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 DNASE1L1P49184 302 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 MAN2A2P49641 1150 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SERPINB8P50452 374 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 HNRNPH2P55795 449 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 NUP107P57740 925 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 TLE4Q04727 773 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 CUL3Q13618 768 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 PCBP2Q15366 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 CPSF6Q16630 551 aaKnown RBP eCLIP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF791Q3KP31 576 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 EMC4Q5J8M3 183 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 METTL2BQ6P1Q9 378 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF585AQ6P3V2 769 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 RNF111Q6ZNA4 994 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 TRILQ7L0X0 811 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 GOLGA7Q7Z5G4 137 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 C9orf40Q8IXQ3 194 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ST13P4Q8IZP2 240 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 RNF175Q8N4F7 328 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 OR5M9Q8NGP3 310 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 OR10Q1Q8NGQ4 319 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 RIT1Q92963 219 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ATP6V1E2Q96A05 226 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SARAFQ96BY9 339 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SPACA9Q96E40 222 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 GAL3ST4Q96RP7 486 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 VPS11Q9H270 941 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 IPPKQ9H8X2 491 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 MCCC2Q9HCC0 563 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 PNPLA3Q9NST1 481 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 TUBA8Q9NY65 449 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 PSD3Q9NYI0 1048 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 CPSF2Q9P2I0 782 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ITGB1BP2Q9UKP3 347 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ACAD8Q9UKU7 415 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 BOKQ9UMX3 212 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 ZNF407Q9C0G0 2248 aa10.86□□□□□ -0.67
NUDCD3-211ENST00000497978 DNAJC13O75165 2243 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms