RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 RDH16O75452 317 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 ANP32DO95626 131 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 HSD17B1P14061 328 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 PPIBP23284 216 aaKnown RBP13.36□□□□□ -0.27
VPS26A-209ENST00000497564 ME2P23368 584 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 ITPKBP27987 946 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 CCKBRP32239 447 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 PLIN5Q00G26 463 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 C18orf63Q68DL7 685 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 CYB5D1Q6P9G0 228 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 MED25Q71SY5 747 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 GPR155Q7Z3F1 870 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-209ENST00000497564 EXOSC8Q96B26 276 aaKnown RBP13.36□□□□□ -0.27
VPS26A-209ENST00000497564 CPPED1Q9BRF8 314 aaPredicted RBP13.36□□□□□ -0.27
VPS26A-209ENST00000497564 NEUROD4Q9HD90 331 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 SLAMF7Q9NQ25 335 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 SLC6A13Q9NSD5 602 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 IRAK4Q9NWZ3 460 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 TAS2R9Q9NYW1 312 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 ADA2Q9NZK5 511 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 SUCOQ9UBS9 1254 aaKnown RBP13.36□□□□□ -0.27
VPS26A-209ENST00000497564 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 SRPK3Q9UPE1 567 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 ATMQ13315 3056 aa13.36□□□□□ -0.27
VPS26A-209ENST00000497564 A0A0A6YYC8 382 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 H0YHG0 523 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 I3L1I5 382 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 DSCR3O14972 297 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 ZNF749O43361 778 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 CHST10O43529 356 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 DNAJB6O75190 326 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 CIB2O75838 187 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 PDE5AO76074 875 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 CPSF4O95639 269 aaKnown RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 C6orf47O95873 294 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 RNH1P13489 461 aaKnown RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 NTSP30990 170 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 HBA1P69905 142 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 OLR1P78380 273 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 ELF3P78545 371 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 FXNQ16595 210 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 RABL3Q5HYI8 236 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 HPS6Q86YV9 775 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 TRIML2Q8N7C3 387 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 RCBTB1Q8NDN9 531 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 OR5T3Q8NGG3 340 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 OR4A15Q8NGL6 344 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 TANKQ92844 425 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 UCN3Q969E3 161 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 NAF1Q96HR8 494 aaKnown RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 ZNF681Q96N22 645 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 CSF3RQ99062 836 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 NDC1Q9BTX1 674 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 TRIM4Q9C037 500 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 RPF2Q9H7B2 306 aaKnown RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 GIMAP4Q9NUV9 329 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 C5AR2Q9P296 337 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-209ENST00000497564 CDC14AQ9UNH5 594 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 ENTPD4Q9Y227 616 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 L3MBTL1Q9Y468 752 aa13.35□□□□□ -0.27
VPS26A-209ENST00000497564 A0A087WV48 116 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 DXOO77932 396 aaKnown RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 GSNP06396 782 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 IFI6P09912 130 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 FGF5P12034 268 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 EFNA1P20827 205 aaPredicted RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 EIF2S3P41091 472 aaKnown RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 MANFP55145 182 aaKnown RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 SELPLGQ14242 412 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 COL28A1Q2UY09 1125 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 GTDC1Q4AE62 458 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 PHF19Q5T6S3 580 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 RHBDD2Q6NTF9 364 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 ZNF621Q6ZSS3 439 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 OR4K14Q8NGD5 310 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 WDR36Q8NI36 951 aaKnown RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 ZFP90Q8TF47 636 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 FGF11Q92914 225 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 CNRIP1Q96F85 164 aaPredicted RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 LIN37Q96GY3 246 aaPredicted RBP13.34□□□□□ -0.27
VPS26A-209ENST00000497564 SLC46A1Q96NT5 459 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 AMDHD1Q96NU7 426 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 OR6C1Q96RD1 312 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 BBS4Q96RK4 519 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 MUC13Q9H3R2 512 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 GLIPR2Q9H4G4 154 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 KAT8Q9H7Z6 458 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms