RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CDC42EP5Q6NZY7 148 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 FBXL22Q6P050 247 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 CWC27Q6UX04 472 aaKnown RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 WDR88Q6ZMY6 472 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 GDPGP1Q6ZNW5 385 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ASRGL1Q7L266 308 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ADCK1Q86TW2 530 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ELMOD2Q8IZ81 293 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 PARP8Q8N3A8 854 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ICA1LQ8NDH6 482 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 CNNM3Q8NE01 707 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 RDH11Q8TC12 318 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 GTF3AQ92664 365 aaKnown RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 C11orf52Q96A22 123 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 MRPL24Q96A35 216 aaKnown RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 ESAMQ96AP7 390 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 POM121L2Q96KW2 1035 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 DCTN5Q9BTE1 182 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 KRT23Q9C075 422 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 GFRA4Q9GZZ7 299 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 PARLQ9H300 379 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 SP140LQ9H930 580 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 PLEKHA3Q9HB20 300 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 HPS4Q9NQG7 708 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 FAM212BQ9NTI7 297 aaPredicted RBP3.37□□□□□ -1.87
SMC4-225ENST00000497203 THEGQ9P2T0 379 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 ENTPD4Q9Y227 616 aa3.37□□□□□ -1.87
SMC4-225ENST00000497203 SNED1Q8TER0 1413 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 IGHV4-30-2A0A087WSY4 118 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 IGHV3-38A0A0C4DH36 116 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 BCLAF3A2AJT9 711 aaKnown RBP3.36□□□□□ -1.87
SMC4-225ENST00000497203 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 MEI4A8MW99 385 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 G3V2L1 256 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 IDH3BO43837 385 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 TSPAN2O60636 221 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 LRP3O75074 770 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 B3GALNT1O75752 331 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 OR6B1O95007 311 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 SERPINB2P05120 415 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 FCER2P06734 321 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 FHP07954 510 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 ADORA3P0DMS8 318 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 CCNA2P20248 432 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 CCL11P51671 97 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 GMFBP60983 142 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 IRX1P78414 480 aaPredicted RBP3.36□□□□□ -1.87
SMC4-225ENST00000497203 FASTKQ14296 549 aaKnown RBP3.36□□□□□ -1.87
SMC4-225ENST00000497203 P2RY14Q15391 338 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 SHROOM1Q2M3G4 852 aaPredicted RBP3.36□□□□□ -1.87
SMC4-225ENST00000497203 EPC2Q52LR7 807 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 CMPK2Q5EBM0 449 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 ZC2HC1BQ5TFG8 222 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 IL23RQ5VWK5 629 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.36□□□□□ -1.87
SMC4-225ENST00000497203 PCNPQ8WW12 178 aaKnown RBP3.36□□□□□ -1.87
SMC4-225ENST00000497203 ANKRD27Q96NW4 1050 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 AGAP3Q96P47 875 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 STRADBQ9C0K7 418 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 SIRPDQ9H106 197 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 PLEKHA6Q9Y2H5 1048 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 UBE4BO95155 1302 aa3.36□□□□□ -1.87
SMC4-225ENST00000497203 MEX3AA1L020 520 aaKnown RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 NEDD8-MDP1E9PL57 170 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 FBP2O00757 339 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 DCXO43602 365 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 TGFAP01135 160 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 CALCAP01258 141 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 ZNF883P0CG24 379 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 RALAP11233 206 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 GNSP15586 552 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 CD1DP15813 335 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 RABIFP47224 123 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 SLC1A6P48664 564 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 CLK1P49759 484 aaKnown RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 PEX3P56589 373 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 RPL27P61353 136 aaKnown RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 SRPXP78539 464 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 FKBP3Q00688 224 aaKnown RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 SLC17A1Q14916 467 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 INAQ16352 499 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 KNOP1Q1ED39 458 aaKnown RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 TAF1BQ53T94 588 aaPredicted RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 C2CD6Q53TS8 623 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 NEPROQ6NW34 567 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 ZNF613Q6PF04 617 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 MCM10Q7L590 875 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 BNIPLQ7Z465 357 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 YRDCQ86U90 279 aaKnown RBP3.35□□□□□ -1.87
SMC4-225ENST00000497203 SLC22A16Q86VW1 577 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 ERC1Q8IUD2 1116 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 WDR49Q8IV35 697 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 LRRC17Q8N6Y2 441 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 AQP11Q8NBQ7 271 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 C11orf45Q8TAV5 145 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 FBXO25Q8TCJ0 367 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 MOCOSQ96EN8 888 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 SLC45A3Q96JT2 553 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms