RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 CLDN14O95500 239 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 IGKV3-11P04433 115 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 P04436 131 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 TPOP07202 933 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 SNRPAP09012 282 aaKnown RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 GALNSP34059 522 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 ASPHQ12797 758 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 C10orf62Q5T681 223 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 NDUFAF5Q5TEU4 345 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 FRG2Q64ET8 278 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 TMEM211Q6ICI0 200 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 ARHGAP11AQ6P4F7 1023 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 SLC22A16Q86VW1 577 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 SRRM1Q8IYB3 904 aaKnown RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 ST13P4Q8IZP2 240 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 SLC15A4Q8N697 577 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 GOLM1Q8NBJ4 401 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 NUBPLQ8TB37 319 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 DCAKDQ8WVC6 231 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 CDK15Q96Q40 435 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 FRG2BQ96QU4 278 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 MRPL57Q9BQC6 102 aaKnown RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 SACM1LQ9NTJ5 587 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 GLOD5A6NK44 160 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 WASHC1A8K0Z3 465 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 ADAM10O14672 748 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 TMPRSS11DO60235 418 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 SEMA3DO95025 777 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 SLC35E2P0CK97 266 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 COX6B1P14854 86 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 IFT88Q13099 833 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 SLC22A10Q63ZE4 541 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 C3P1Q6ZMU1 363 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 DGAT2L6Q6ZPD8 337 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 GK5Q6ZS86 529 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 FAM47EQ6ZV65 393 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 SLC29A4Q7RTT9 530 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 PAGE2Q7Z2X7 111 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 NUDT13Q86X67 352 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 MCEMP1Q8IX19 187 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 MYRIPQ8NFW9 859 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 OR52B6Q8NGF0 335 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 SLC22A8Q8TCC7 542 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 RIT1Q92963 219 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 FBXL20Q96IG2 436 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 DMRTA2Q96SC8 542 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 CNPPD1Q9BV87 410 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF717Q9BY31 904 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-214ENST00000496043 MRPL46Q9H2W6 279 aaKnown RBP11.79□□□□□ -0.52
PTPRF-214ENST00000496043 IL1RL2Q9HB29 575 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 ZBTB26Q9HCK0 441 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 COQ3Q9NZJ6 369 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 XPR1Q9UBH6 696 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
PTPRF-214ENST00000496043 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 PINLYPA6NC86 204 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 OR6C76A6NM76 312 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 FAM166BA8MTA8 275 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 G3V3Y1 287 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 HRKO00198 91 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 PGRMC2O15173 223 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF354AO60765 605 aaPredicted RBP11.78□□□□□ -0.52
PTPRF-214ENST00000496043 PRKRAO75569 313 aaKnown RBP11.78□□□□□ -0.52
PTPRF-214ENST00000496043 GBAP04062 536 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 KLK1P06870 262 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 NR2F6P10588 404 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 PRF1P14222 555 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 PIK3R1P27986 724 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 SERPINB3P29508 390 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ECHS1P30084 290 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 PTGER4P35408 488 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 HERVK_113P63132 956 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ERVK-8P63133 956 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 TBL3Q12788 808 aaKnown RBP11.78□□□□□ -0.52
PTPRF-214ENST00000496043 SLC10A1Q14973 349 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 SPRED3Q2MJR0 410 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF791Q3KP31 576 aaPredicted RBP11.78□□□□□ -0.52
PTPRF-214ENST00000496043 SGO1Q5FBB7 561 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 CCNYL2Q5T2Q4 361 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 RNF111Q6ZNA4 994 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 TIFABQ6ZNK6 161 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 TRMT10CQ7L0Y3 403 aaKnown RBP11.78□□□□□ -0.52
PTPRF-214ENST00000496043 CD163Q86VB7 1156 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 C9orf40Q8IXQ3 194 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 IFT20Q8IY31 132 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 CEP112Q8N8E3 955 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 OR4K14Q8NGD5 310 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 UCN3Q969E3 161 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 NSUN5Q96P11 429 aaKnown RBP11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ERVK-6Q9BXR3 956 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 TTTY12Q9BZ98 90 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ELOVL6Q9H5J4 265 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ZDHHC11Q9H8X9 412 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 SEMA4BQ9NPR2 832 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms