RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	POGLUT1	Q8NBL1	392 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GPR26	Q8NDV2	337 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	NRGN	Q92686	78 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	INPP5D	Q92835	1189 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GLYATL1	Q969I3	302 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	STAMBPL1	Q96FJ0	436 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	FBXL20	Q96IG2	436 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TGM7	Q96PF1	710 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TSGA13	Q96PP4	275 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	OR6C1	Q96RD1	312 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	MACROD1	Q9BQ69	325 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	EFHD1	Q9BUP0	239 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	NUP85	Q9BW27	656 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ADGRE3	Q9BY15	652 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	KRTAP9-2	Q9BYQ4	174 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	RAB33B	Q9H082	229 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	OR2AG1	Q9H205	316 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	OPA3	Q9H6K4	179 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GRPEL1	Q9HAV7	217 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	PCDH9	Q9HC56	1237 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC40A1	Q9NP59	571 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC6A13	Q9NSD5	602 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SMOX	Q9NWM0	555 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	AIPL1	Q9NZN9	384 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SH3BP4	Q9P0V3	963 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	AMACR	Q9UHK6	382 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ANAPC7	Q9UJX3	599 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ICK	Q9UPZ9	632 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	WDR37	Q9Y2I8	494 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SNX5	Q9Y5X3	404 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SVEP1	Q4LDE5	3571 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	NBEAL2	Q6ZNJ1	2754 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CNTRL	Q7Z7A1	2325 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SNRNP200	O75643	2136 aa	Known RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	IGHV5-51	A0A0C4DH38	117 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	RGSL1	A5PLK6	1076 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	TLCD2	A6NGC4	264 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF487	B1APH4	448 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	NPIPB11	E5RHQ5	1161 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	KCNK1	O00180	336 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	QSOX1	O00391	747 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	E2F3	O00716	465 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	MATN3	O15232	486 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	MPPED1	O15442	326 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	GRID2	O43424	1007 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	SPAG6	O75602	509 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	CREG1	O75629	220 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC4A1	P02730	911 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	TPM2	P07951	284 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	PIRT	P0C851	137 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	EBLN1	P0CF75	366 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	FCGR2A	P12318	317 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC2A4	P14672	509 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	FOLR1	P15328	257 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	NELFE	P18615	380 aa	Known RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	XRCC1	P18887	633 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ITGA3	P26006	1051 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	CASP14	P31944	242 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	RORA	P35398	523 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	CD86	P42081	329 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	CTSC	P53634	463 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	MFAP4	P55083	255 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	PLIN5	Q00G26	463 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	FOXM1	Q08050	763 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	PPID	Q08752	370 aa	Known RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	GPS2	Q13227	327 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	PIGH	Q14442	188 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	MFSD13A	Q14CX5	517 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	PRKD1	Q15139	912 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF658B	Q4V348	819 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	CCDC183	Q5T5S1	534 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	PDPK2P	Q6A1A2	396 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	TRAT1	Q6PIZ9	186 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ABRAXAS1	Q6UWZ7	409 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	WASH2P	Q6VEQ5	465 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	FAM92B	Q6ZTR7	304 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF551	Q7Z340	670 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	GPAT4	Q86UL3	456 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	LRRC49	Q8IUZ0	686 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	CNPY4	Q8N129	248 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	BBS5	Q8N3I7	341 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	TRAM1L1	Q8N609	369 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	TMEM217	Q8N7C4	229 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	NAT8L	Q8N9F0	302 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC38A9	Q8NBW4	561 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ABHD11	Q8NFV4	315 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ELMOD3	Q96FG2	381 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	IMP4	Q96G21	291 aa	Known RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF514	Q96K75	400 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ADAD1	Q96M93	576 aa	Known RBP	4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	VPS35	Q96QK1	796 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	OR2A14	Q96R47	310 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	BPIFA3	Q9BQP9	254 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	AIFM2	Q9BRQ8	373 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	TUBB6	Q9BUF5	446 aa		4.04	□□□□□ -1.76
VPS52-222	ENST00000495981	ZSCAN5A	Q9BUG6	496 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms