RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CLDN16Q9Y5I7 305 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 ZFHX4Q86UP3 3567 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 CACNA1GO43497 2377 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 A8MUA0 341 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 TGFBR3LH3BV60 316 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 EDF1O60869 148 aaKnown RBP16■□□□□ 0.15
HDAC6-235ENST00000495515 DIAPH2O60879 1101 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 CPMP14384 443 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 PORP16435 677 aaPredicted RBP16■□□□□ 0.15
HDAC6-235ENST00000495515 TACR1P25103 407 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 ITGA3P26006 1051 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 EPHA3P29320 983 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 GALNSP34059 522 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 HPCAL1P37235 193 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 CCL11P51671 97 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 SOX8P57073 446 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 BTBD16Q32M84 506 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 C6orf163Q5TEZ5 329 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 VWA5B1Q5TIE3 1220 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 CPZQ66K79 652 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 NXNQ6DKJ4 435 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 JMJD6Q6NYC1 403 aaPredicted RBP16■□□□□ 0.15
HDAC6-235ENST00000495515 LARP4Q71RC2 724 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC6-235ENST00000495515 SPATA19Q7Z5L4 167 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 GALNT16Q8N428 558 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 CEP70Q8NHQ1 597 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 M1APQ8TC57 530 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 ACTRT2Q8TDY3 377 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 MTERF3Q96E29 417 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 MAELQ96JY0 434 aaKnown RBP16■□□□□ 0.15
HDAC6-235ENST00000495515 ART5Q96L15 291 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 WDR77Q9BQA1 342 aaPredicted RBP16■□□□□ 0.15
HDAC6-235ENST00000495515 REEP4Q9H6H4 257 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 WDR55Q9H6Y2 383 aaPredicted RBP16■□□□□ 0.15
HDAC6-235ENST00000495515 BAIAP2L1Q9UHR4 511 aa16■□□□□ 0.15
HDAC6-235ENST00000495515 GOLGA8QA0A0J9YX86 632 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 GOLGA8OA6NCC3 632 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 WASHC1A8K0Z3 465 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 C17orf105B2RV13 164 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 GOLGA8NF8WBI6 632 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 MKRN2OSH3BPM6 223 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 VIMP08670 466 aaKnown RBP15.99■□□□□ 0.15
HDAC6-235ENST00000495515 PRPS1L1P21108 318 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 POLE2P56282 527 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 SLC26A5P58743 744 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 CHAF1BQ13112 559 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 TICAM1Q8IUC6 712 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 MMP21Q8N119 569 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 MORN4Q8NDC4 146 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 B3GNT7Q8NFL0 401 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 UCN3Q969E3 161 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 EXOSC8Q96B26 276 aaKnown RBP15.99■□□□□ 0.15
HDAC6-235ENST00000495515 ZNF764Q96H86 408 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-235ENST00000495515 EGLN2Q96KS0 407 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 PRPF18Q99633 342 aaKnown RBP15.99■□□□□ 0.15
HDAC6-235ENST00000495515 TRIM55Q9BYV6 548 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 LHPPQ9H008 270 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 MMP25Q9NPA2 562 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 SLC35C2Q9NQQ7 365 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 TAS2R7Q9NYW3 318 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 C5AR2Q9P296 337 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 NUP210LQ5VU65 1888 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 ZFYVE26Q68DK2 2539 aa15.99■□□□□ 0.15
HDAC6-235ENST00000495515 MYOCOSA0A1B0GUC4 107 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 ERVH48-1M5A8F1 160 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 ZNF195O14628 629 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 POLR3GO15318 223 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 TBX19O60806 448 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 ALPPP05187 535 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 TROVE2P10155 538 aaKnown RBP eCLIP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 G6PDP11413 515 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 NTSP30990 170 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 AQP5P55064 265 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 SLC9B1Q4ZJI4 515 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 LRRC25Q8N386 305 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 CLHC1Q8NHS4 586 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 RIT1Q92963 219 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 GFM2Q969S9 779 aaKnown RBP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 PPCDCQ96CD2 204 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 VMP1Q96GC9 406 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 THOC3Q96J01 351 aaKnown RBP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 BBS4Q96RK4 519 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 ADNPQ9H2P0 1102 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 COPS7AQ9UBW8 275 aa15.98■□□□□ 0.15
HDAC6-235ENST00000495515 PPIEQ9UNP9 301 aaKnown RBP15.98■□□□□ 0.15
HDAC6-235ENST00000495515 A6NL46 340 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 AKAP10O43572 662 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 LRATO95237 230 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 ATP1B1P05026 303 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 SFTPCP11686 197 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 NT5EP21589 574 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 MPIP34949 423 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 FEN1P39748 380 aaKnown RBP15.97■□□□□ 0.15
HDAC6-235ENST00000495515 CLCN2P51788 898 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 CLDN8P56748 225 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 MYBPC3Q14896 1274 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 PTGR1Q14914 329 aa15.97■□□□□ 0.15
HDAC6-235ENST00000495515 RPS6KA2Q15349 733 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms