RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 A0A1W2PS29 197 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 KIR3DP1A8MWS1 328 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 TRIM49D1C9J1S8 452 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 NPIPA2E9PIF3 369 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 NPIPA3F8WFD2 350 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 PPP6CO00743 305 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ADAM10O14672 748 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 TMPRSS11DO60235 418 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 SMIM24O75264 130 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CLDN14O95500 239 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 GPR75O95800 540 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 TUBB4AP04350 444 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 KLK1P06870 262 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 FAM58BPP0C7Q3 252 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CTAGE8P0CG41 777 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 COX7A2P14406 83 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ALOX15P16050 662 aaPredicted RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 ECHS1P30084 290 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 BUD31P41223 144 aaPredicted RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 DNASE1L1P49184 302 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 SERPINB9P50453 376 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CDH13P55290 713 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 HERVK_113P63132 956 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ERVK-8P63133 956 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 PHEXP78562 749 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 TNFRSF17Q02223 184 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 BIKQ13323 160 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 PIGGQ5H8A4 983 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 TTC19Q6DKK2 380 aaPredicted RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 MRM1Q6IN84 353 aaKnown RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 BNC2Q6ZN30 1099 aaPredicted RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 FAM47EQ6ZV65 393 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CD163Q86VB7 1156 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 RELL1Q8IUW5 271 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CTAGE4Q8IX94 777 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ZCCHC7Q8N3Z6 543 aaKnown RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 L3MBTL4Q8NA19 623 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ZFP62Q8NB50 900 aaPredicted RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 MNS1Q8NEH6 495 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 FAM57AQ8TBR7 257 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 DCAKDQ8WVC6 231 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 REPS1Q96D71 796 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 FMO2Q99518 471 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CNPPD1Q9BV87 410 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ERVK-6Q9BXR3 956 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ZNF717Q9BY31 904 aaPredicted RBP8.88□□□□□ -0.99
MSH5-218ENST00000494646 FUT8Q9BYC5 575 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 TSPYL1Q9H0U9 437 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ZBTB26Q9HCK0 441 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 CHST11Q9NPF2 352 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 MS4A12Q9NXJ0 267 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 XPR1Q9UBH6 696 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 PHF11Q9UIL8 331 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 PPT2Q9UMR5 302 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ERVK-19Q9WJR5 959 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 ADGRG4Q8IZF6 3080 aa8.88□□□□□ -0.99
MSH5-218ENST00000494646 FBN2P35556 2912 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 A0A087WUV0 522 aaPredicted RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 A0A0A6YYD5 115 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 A0A1B0GTL3 188 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 CCDC189A1A4V9 331 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 SYNDIG1LA6NDD5 238 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 E9PLN8 166 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 FOXE1O00358 373 aaPredicted RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 DYRK3O43781 588 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 OR10H2O60403 315 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 UGDHO60701 494 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 KRT38O76015 456 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 IGKV3-11P04433 115 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 P04436 131 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 CCL3P10147 92 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 COX6B1P14854 86 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 PIGAP37287 484 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 MAGEA5P43359 124 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 MAGEA12P43365 314 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 KIR3DL1P43629 444 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 IGLV3-21P80748 117 aaPredicted RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 CUL3Q13618 768 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 GXYLT1Q4G148 440 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 GLE1Q53GS7 698 aaKnown RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 OPN5Q6U736 354 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 RTL4Q6ZR62 310 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 TICAM1Q8IUC6 712 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 C9orf40Q8IXQ3 194 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 GPALPP1Q8IXQ4 340 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 ST13P4Q8IZP2 240 aaPredicted RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 RPRMLQ8N4K4 120 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 OR4F6Q8NGB9 312 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 OR5M9Q8NGP3 310 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 OR8K3Q8NH51 312 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 RIT1Q92963 219 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 SDCCAG3Q96C92 435 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 DMRTA2Q96SC8 542 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 SERPINI1Q99574 410 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 VKORC1Q9BQB6 163 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 NTMT1Q9BV86 223 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 MRPL1Q9BYD6 325 aaKnown RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 TTTY12Q9BZ98 90 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 RUBCNLQ9H714 662 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms