RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ENY2Q9NPA8 101 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 DNMT3AQ9Y6K1 912 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-207ENST00000494090 ARHGEF15O94989 841 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 CSN2P05814 226 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 CRISP1P54107 249 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 TMEM225Q6GV28 225 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 MTMR10Q9NXD2 777 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 EIF3FO00303 357 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-207ENST00000494090 TSPAN4O14817 238 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 VILLO15195 856 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 OAZ2O95190 189 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 CSTAP01040 98 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 IQCF3P0C7M6 154 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 GSTT2P0CG29 244 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 GSTM2P28161 218 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 OR8J1Q8NGP2 316 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 LGALS12Q96DT0 336 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 GABRQQ9UN88 632 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 PCDHGA7Q9Y5G6 932 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 A0A1W2PP55 124 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 TTLL8A6PVC2 850 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 OXSR1O95747 527 aaPredicted RBP18.33■□□□□ 0.53
COL27A1-207ENST00000494090 LSAMPQ13449 338 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 CLCA4Q14CN2 919 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 UNQ6126/PRO20091Q6UXV3 157 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 SCML4Q8N228 414 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 PAAF1Q9BRP4 392 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 GPRC5BQ9NZH0 403 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 TEX13DA0A0J9YY54 714 aaPredicted RBP18.33■□□□□ 0.53
COL27A1-207ENST00000494090 A0A1W2PQU0 124 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 EIF1AXP47813 144 aaKnown RBP18.33■□□□□ 0.53
COL27A1-207ENST00000494090 IST1P53990 364 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 RPL6Q02878 288 aaKnown RBP18.33■□□□□ 0.53
COL27A1-207ENST00000494090 MLLT1Q03111 559 aaPredicted RBP18.33■□□□□ 0.53
COL27A1-207ENST00000494090 RNF111Q6ZNA4 994 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 CCDC116Q8IYX3 515 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.33■□□□□ 0.532e-7■■■□□ 16.6
COL27A1-207ENST00000494090 TMEM45AQ9NWC5 275 aa18.33■□□□□ 0.53
COL27A1-207ENST00000494090 HEPACAM2A8MVW5 462 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 TTC34A8MYJ7 566 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 CCINQ13939 588 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 SLC35F1Q5T1Q4 408 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 OR51G2Q8NGK0 314 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 TRUB1Q8WWH5 349 aaKnown RBP18.33■□□□□ 0.52
COL27A1-207ENST00000494090 FKBP10Q96AY3 582 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 CREB3L1Q96BA8 519 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 BMFQ96LC9 184 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 TTYH2Q9BSA4 534 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 TMEM121BQ9BXQ6 578 aaPredicted RBP18.33■□□□□ 0.52
COL27A1-207ENST00000494090 ARMC1Q9NVT9 282 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 NPIPA2E9PIF3 369 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 NPIPA3F8WFD2 350 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 PTGESO14684 152 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 ANXA3P12429 323 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 C5AR1P21730 350 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 MAGEA6P43360 314 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 NUP43Q8NFH3 380 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 DHRS4Q9BTZ2 278 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 TAS2R10Q9NYW0 307 aa18.33■□□□□ 0.52
COL27A1-207ENST00000494090 LRRN3E7EW58 273 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 SCAMP2O15127 329 aaKnown RBP18.32■□□□□ 0.52
COL27A1-207ENST00000494090 SLC10A3P09131 477 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 T-ENOLP0DO92 83 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 TBPL1P62380 186 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 ENPP6Q6UWR7 440 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 LRRC25Q8N386 305 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-207ENST00000494090 ZNF283Q8N7M2 679 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 LRRN3Q9H3W5 708 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 EIF1AYO14602 144 aaKnown RBP18.32■□□□□ 0.52
COL27A1-207ENST00000494090 HCRTR2O43614 444 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 PLCXD2Q0VAA5 305 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 GBX1Q14549 363 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 OR2T33Q8NG76 320 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 FOXJ1Q92949 421 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 BORCS8Q96FH0 119 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 TMEM41AQ96HV5 264 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 NME4O00746 187 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 CATSPEREQ5SY80 951 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 SLC22A8Q8TCC7 542 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 FGF4P08620 206 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 PGCP20142 388 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 GABRA3P34903 492 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 DHCR24Q15392 516 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 SH3YL1Q96HL8 342 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-207ENST00000494090 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
COL27A1-207ENST00000494090 OR6C74A6NCV1 312 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 CASP6P55212 293 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 POU4F2Q12837 409 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 ZNF648Q5T619 568 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-207ENST00000494090 LIPKQ5VXJ0 399 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 SPAG16Q8N0X2 631 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 OR2L2Q8NH16 312 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 MGLLQ99685 303 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 A0A1B0GVT2 93 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 C2orf78A6NCI8 922 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 SLC1A7O00341 560 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 CKMT1AP12532 417 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 CELP19835 753 aa18.31■□□□□ 0.52
COL27A1-207ENST00000494090 VAMP1P23763 118 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms