RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ABOP16442 354 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 HTR1EP28566 365 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 SERPINB9P50453 376 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 CCNG1P51959 295 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 CASP6P55212 293 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 HERVK_113P63132 956 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ERVK-8P63133 956 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 TNFRSF17Q02223 184 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 TRAF3Q13114 568 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ART3Q13508 389 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 CUL3Q13618 768 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF267Q14586 743 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.142e-6■□□□□ 8.1
LRCH3-219ENST00000494069 GLE1Q53GS7 698 aaKnown RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 PIGGQ5H8A4 983 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 LETMD1Q6P1Q0 360 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 C9orf40Q8IXQ3 194 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 SRRM1Q8IYB3 904 aaKnown RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 MMP21Q8N119 569 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF808Q8N4W9 903 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 PSD4Q8NDX1 1056 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 MNS1Q8NEH6 495 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 OR2M7Q8NG81 312 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 OR4F6Q8NGB9 312 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 TANKQ92844 425 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ATP6V1E2Q96A05 226 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 CNPPD1Q9BV87 410 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ERVK-6Q9BXR3 956 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 MRPL1Q9BYD6 325 aaKnown RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 DDX31Q9H8H2 851 aaKnown RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 TIMMDC1Q9NPL8 285 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 SEMA4BQ9NPR2 832 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 TEX10Q9NXF1 929 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF180Q9UJW8 692 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF225Q9UK10 706 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ERVK-19Q9WJR5 959 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 ENTPD4Q9Y227 616 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 LIPGQ9Y5X9 500 aa7.9□□□□□ -1.14
LRCH3-219ENST00000494069 EML6Q6ZMW3 1958 aa7.9□□□□□ -1.15
LRCH3-219ENST00000494069 FBN2P35556 2912 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 A0A087WUV0 522 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 A8MT66 165 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 FOXO6A8MYZ6 492 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 STX16-NPEPL1H3BU86 382 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 FOXE1O00358 373 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 STX16O14662 325 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 HNRNPRO43390 633 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 UGDHO60701 494 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 SMIM24O75264 130 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 KRT38O76015 456 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 LRATO95237 230 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 GPR75O95800 540 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 MLYCDO95822 493 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TUBB4AP04350 444 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 KLK1P06870 262 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TPOP07202 933 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RPS17P08708 135 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 SNRPAP09012 282 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RHOXF2BP0C7M4 288 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 NR2F6P10588 404 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 COX7A2P14406 83 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 CNR1P21554 472 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 PTGS2P35354 604 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 PIGAP37287 484 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 DNASE1L1P49184 302 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 PPIAP62937 165 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 PLGLB1Q02325 96 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 ZNF630Q2M218 657 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 ZNF791Q3KP31 576 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TCHHL1Q5QJ38 904 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TEX35Q5T0J7 233 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 FRG2Q64ET8 278 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TTC19Q6DKK2 380 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 CYP20A1Q6UW02 462 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RPTNQ6XPR3 784 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TMEM64Q6YI46 380 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 BNC2Q6ZN30 1099 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RTL4Q6ZR62 310 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 CEP128Q6ZU80 1094 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 MILR1Q7Z6M3 343 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 GSPT2Q8IYD1 628 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RPRMLQ8N4K4 120 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 MARVELD2Q8N4S9 558 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 POGLUT1Q8NBL1 392 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 OR5L2Q8NGL0 311 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 OR8K3Q8NH51 312 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 FAM57AQ8TBR7 257 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 ZNF483Q8TF39 744 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 REPS1Q96D71 796 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RBM18Q96H35 190 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 FRG2BQ96QU4 278 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 DMRTA2Q96SC8 542 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 HBEGFQ99075 208 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 MRPL57Q9BQC6 102 aaKnown RBP7.89□□□□□ -1.15
LRCH3-219ENST00000494069 RHOXF2Q9BQY4 288 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 CENPKQ9BS16 269 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 NTMT1Q9BV86 223 aa7.89□□□□□ -1.15
LRCH3-219ENST00000494069 TSPYL1Q9H0U9 437 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms