RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SYT16Q17RD7 645 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 SLC5A12Q1EHB4 618 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 TMEM35AQ53FP2 167 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 TMEM236Q5W0B7 351 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 ANKRD34AQ69YU3 496 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 CEACAM20Q6UY09 585 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 SLC9B2Q86UD5 537 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 TRAPPC5Q8IUR0 188 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 CLDN22Q8N7P3 220 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 B3GNT7Q8NFL0 401 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 CORO1BQ9BR76 489 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 CDADC1Q9BWV3 514 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 TAPBPLQ9BX59 468 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 POLDIP3Q9BY77 421 aaKnown RBP10.93□□□□□ -0.66
RFC4-214ENST00000494047 KRCC1Q9NPI7 259 aaPredicted RBP10.93□□□□□ -0.66
RFC4-214ENST00000494047 ABCB10Q9NRK6 738 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 SEMA3GQ9NS98 782 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 ZNF226Q9NYT6 803 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 PHF11Q9UIL8 331 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 CLEC4EQ9ULY5 219 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 SSR3Q9UNL2 185 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 ERVK-11Q9UQG0 969 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 BTBD3Q9Y2F9 522 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 PCDHGB2Q9Y5G2 931 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 KIAA1549LQ6ZVL6 1849 aa10.93□□□□□ -0.66
RFC4-214ENST00000494047 DOCK6Q96HP0 2047 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 HTR3EA5X5Y0 456 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 TMEM229AB2RXF0 380 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 C1QTNF3-AMACRE9PGA6 284 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 TRIM3O75382 744 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 GCM2O75603 506 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 ETHE1O95571 254 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 NUDT7P0C024 238 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 DBTP11182 482 aaKnown RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 MYL12AP19105 171 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 AQP1P29972 269 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 GPR1P46091 355 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 CCR8P51685 355 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 CTSCP53634 463 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 CRISP3P54108 245 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 ELAVL3Q14576 367 aaKnown RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 MED22Q15528 200 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 DEPDC1Q5TB30 811 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 MFSD4BQ5TF39 518 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 KHDRBS2Q5VWX1 349 aaKnown RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 C12orf73Q69YU5 71 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 LAIR1Q6GTX8 287 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 ZNF770Q6IQ21 691 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 FAM83HQ6ZRV2 1179 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 ARMCX6Q7L4S7 300 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 TRMT11Q7Z4G4 463 aaKnown RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 TMEM25Q86YD3 366 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 CCDC103Q8IW40 242 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 LRRC56Q8IYG6 542 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 CYP4Z2PQ8N1L4 340 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 PARP16Q8N5Y8 322 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 SRFBP1Q8NEF9 429 aaKnown RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 OR10Q1Q8NGQ4 319 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 WDR36Q8NI36 951 aaKnown RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 SMPDL3AQ92484 453 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 HPS1Q92902 700 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 MAL2Q969L2 176 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 OTUB1Q96FW1 271 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 MRGPRX3Q96LB0 322 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 CTRCQ99895 268 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 MED18Q9BUE0 208 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 OR2B2Q9GZK3 357 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 EVA1AQ9H8M9 152 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 NMNAT1Q9HAN9 279 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 SLC25A19Q9HC21 320 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 BCL2L10Q9HD36 194 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 NDUFB11Q9NX14 153 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 GPR83Q9NYM4 423 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 RAB23Q9ULC3 237 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 NUP210Q8TEM1 1887 aaPredicted RBP10.92□□□□□ -0.66
RFC4-214ENST00000494047 MYO10Q9HD67 2058 aa10.92□□□□□ -0.66
RFC4-214ENST00000494047 LOC100506127A0A0U1RQW1 187 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 HYKKA2RU49 373 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 GSAPA4D1B5 854 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ZNF670-ZNF695F2Z2N8 137 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 SYT5O00445 386 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 STK25O00506 426 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 TBX1O43435 398 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 CHST10O43529 356 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 RAB36O95755 333 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 AGR2O95994 175 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 IL3P08700 152 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 STSP08842 583 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 NR2F6P10588 404 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 GALP22466 123 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 EPHA2P29317 976 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 ALDH4A1P30038 563 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 C21orf33P30042 268 aaPredicted RBP10.91□□□□□ -0.66
RFC4-214ENST00000494047 NTSP30990 170 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 PREPP48147 710 aa10.91□□□□□ -0.66
RFC4-214ENST00000494047 XKP51811 444 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms