RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ALPIP09923 528 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF806P0C7X5 589 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 LINC00614P0C842 121 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ERVK-10P10266 1014 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 NDUFB7P17568 137 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CBLP22681 906 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CD27P26842 260 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PSMB4P28070 264 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PIK3CBP42338 1070 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CCR5P51681 352 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 RPS21P63220 83 aaKnown RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 IRF4Q15306 451 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SF3A2Q15428 464 aaKnown RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SIX1Q15475 284 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 TRIP10Q15642 601 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF181Q2M3W8 571 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 LRRC66Q68CR7 880 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 OR5M10Q6IEU7 315 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 C10orf82Q8WW14 230 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 DNASE2BQ8WZ79 361 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 RNF31Q96EP0 1072 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SMIM14Q96QK8 99 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PFDN5Q99471 154 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SOX7Q9BT81 388 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 METTL8Q9H825 291 aaKnown RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CXorf21Q9HAI6 301 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SEPSECSQ9HD40 501 aaKnown RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 FSCN3Q9NQT6 498 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 FAM120CQ9NX05 1096 aaKnown RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 TMEM216Q9P0N5 145 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SUSD2Q9UGT4 822 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 TP53TG5Q9Y2B4 290 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 TRPM6Q9BX84 2022 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 DOCK9Q9BZ29 2069 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 BPTFQ12830 3046 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 BCAT2O15382 392 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CAPN5O15484 640 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 LATO43561 262 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 HCKP08631 526 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ELFN1P0C7U0 828 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 IFI30P13284 250 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 C6P13671 934 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CPN2P22792 545 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PEX2P28328 305 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CD40LGP29965 261 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 DPP6P42658 865 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 OMPP47874 163 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SUOXP51687 545 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 IL9RQ01113 521 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 RGS1Q08116 209 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ASAH1Q13510 395 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ZNHIT3Q15649 155 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PDK4Q16654 411 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF284Q2VY69 593 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 TMEM35AQ53FP2 167 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 RPUSD3Q6P087 351 aaKnown RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CDC73Q6P1J9 531 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 C16orf62Q7Z3J2 963 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 KIAA1191Q96A73 305 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PANX3Q96QZ0 392 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PDCD10Q9BUL8 212 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 FSD1LQ9BXM9 530 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 RIBC2Q9H4K1 309 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 GSX1Q9H4S2 264 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-222ENST00000493919 ASB8Q9H765 288 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PARD6AQ9NPB6 346 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 SEMA4GQ9NTN9 838 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 CA5BQ9Y2D0 317 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 PIEZO1Q92508 2521 aa11.05□□□□□ -0.64
BRCA1-222ENST00000493919 A0A1B0GTW7 788 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 NPIPB15A6NHN6 443 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-222ENST00000493919 RHPN2P1A8MT19 583 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 PAK4O96013 591 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-222ENST00000493919 IFNA10P01566 189 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 CRHP06850 196 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF250P15622 560 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 VIPR1P32241 457 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 OPRL1P41146 370 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 GPR143P51810 404 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 KPNA2P52292 529 aaKnown RBP11.04□□□□□ -0.64
BRCA1-222ENST00000493919 PKNOX1P55347 436 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 RAC3P60763 192 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 TNK1Q13470 666 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 PRPSAP1Q14558 356 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 DUOXA1Q1HG43 343 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 FAXCQ5TGI0 409 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 RPL13AP3Q6NVV1 102 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 DPPA4Q7L190 304 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 ALYREFQ86V81 257 aaKnown RBP11.04□□□□□ -0.64
BRCA1-222ENST00000493919 PARP8Q8N3A8 854 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 RASGEF1CQ8N431 466 aa11.04□□□□□ -0.64
BRCA1-222ENST00000493919 SPACA9Q96E40 222 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-222ENST00000493919 OXNAD1Q96HP4 312 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-222ENST00000493919 ST6GAL2Q96JF0 529 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms