RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 ZPLD1Q8TCW7 415 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 MAIP1Q8WWC4 291 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 PERPQ96FX8 193 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 PDLIM5Q96HC4 596 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 ART5Q96L15 291 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 SERPINB12Q96P63 405 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 UGT2B28Q9BY64 529 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 PIGMQ9H3S5 423 aa13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 IARS2Q9NSE4 1012 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF40A-211ENST00000493468 MYOCOSA0A1B0GUC4 107 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 RNF212BA8MTL3 300 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 CTIFO43310 598 aaKnown RBP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 DYRK3O43781 588 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 H2AFYO75367 372 aaKnown RBP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 CNOT4O95628 575 aaKnown RBP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 CCDC175P0C221 793 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 GABRB3P28472 473 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 RPL21P46778 160 aaKnown RBP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 STT3AP46977 705 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 KCNJ1P48048 391 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 CPA2P48052 419 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 HNMTP50135 292 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 CDKL1Q00532 357 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 TGM3Q08188 693 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 BIKQ13323 160 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 RCAN2Q14206 197 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 SLBPQ14493 270 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 GALNT7Q86SF2 657 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 KRT78Q8N1N4 520 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 CCT6BQ92526 530 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 ANKRD9Q96BM1 317 aaPredicted RBP13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 FBXL20Q96IG2 436 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 TRIM5Q9C035 493 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 ROGDIQ9GZN7 287 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 PRDM7Q9NQW5 492 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 FETUBQ9UGM5 382 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 C15orf41Q9Y2V0 281 aa13.02□□□□□ -0.33
PRPF40A-211ENST00000493468 ANKDD1BA6NHY2 528 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 DEFB108AA8MXU0 73 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 SIAH2O43255 324 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 TRAPPC6AO75865 159 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 RCBTB2O95199 551 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 SNX4O95219 450 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 PAX1P15863 534 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 MSH2P43246 934 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 KCNC1P48547 511 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 EEF1A1P68104 462 aaKnown RBP13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 KRTAP1-1Q07627 177 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 GPS1Q13098 491 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 DCST1Q5T197 706 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 EEF1A1P5Q5VTE0 462 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 VN1R5Q7Z5H4 357 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 ADGRE4PQ86SQ3 457 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 LUZP2Q86TE4 346 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 CNTN4Q8IWV2 1026 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 ANKRD7Q92527 254 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 SIGLEC10Q96LC7 697 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 KCNC2Q96PR1 638 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 UCN2Q96RP3 112 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 TM9SF2Q99805 663 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 TSPY26PQ9H489 355 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 CORO1CQ9ULV4 474 aaPredicted RBP13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 SPACA6W5XKT8 324 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 MED12Q93074 2177 aa13.01□□□□□ -0.33
PRPF40A-211ENST00000493468 TP53I11O14683 189 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 SCELO95171 688 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 ACTL6AO96019 429 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 CYP4B1P13584 511 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 MC3RP41968 323 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 SLC6A12P48065 614 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 PTH2RP49190 550 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 TERF1P54274 439 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 DIO3P55073 304 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 FOXF2Q12947 444 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 RPS6KA2Q15349 733 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 FNDC7Q5VTL7 733 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 SCIMPQ6UWF3 145 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 SLC29A4Q7RTT9 530 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 RNF214Q8ND24 703 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 SRFBP1Q8NEF9 429 aaKnown RBP13□□□□□ -0.33
PRPF40A-211ENST00000493468 DIO2Q92813 273 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
PRPF40A-211ENST00000493468 DGAT2Q96PD7 388 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 CAPS2Q9BXY5 557 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 WWTR1Q9GZV5 400 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 UBTD1Q9HAC8 227 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 GPRC5BQ9NZH0 403 aa13□□□□□ -0.33
PRPF40A-211ENST00000493468 C6orf203Q9P0P8 240 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms