RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 F2RL3Q96RI0 385 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 EFCAB11Q9BUY7 163 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 CTNNAL1Q9UBT7 734 aa16.21■□□□□ 0.19
NUP50-218ENST00000493456 CNOT11Q9UKZ1 510 aaKnown RBP16.21■□□□□ 0.19
NUP50-218ENST00000493456 FBN1P35555 2871 aaKnown RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 ANKRD33BA6NCL7 494 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 MBD3L4A6NDZ8 208 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 MBD3L3A6NE82 208 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 MBD3L5A6NJ08 208 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 TRIM3O75382 744 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 BANF1O75531 89 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 SCELO95171 688 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 ATP5A1P25705 553 aaKnown RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 CDC25BP30305 580 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 RPL21P46778 160 aaKnown RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 TSNQ15631 228 aaKnown RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 NTRK2Q16620 822 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 C18orf21Q32NC0 220 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 NHSL2Q5HYW2 709 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 PAGE2BQ5JRK9 111 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 ADNP2Q6IQ32 1131 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 SLC29A4Q7RTT9 530 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 CXorf67Q86X51 503 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 LRRC75A-AS1Q8N1F1 130 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 ACOT4Q8N9L9 421 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 SPC24Q8NBT2 197 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 MBD3L2Q8NHZ7 208 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 WDR34Q96EX3 536 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 RBM18Q96H35 190 aaKnown RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 NAP1L3Q99457 506 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 RBSNQ9H1K0 784 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 EPB41L4BQ9H329 900 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 CNOT10Q9H9A5 744 aaKnown RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 DNAJC11Q9NVH1 559 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 ZNF490Q9ULM2 529 aaPredicted RBP16.2■□□□□ 0.18
NUP50-218ENST00000493456 CAMK2AQ9UQM7 478 aa16.2■□□□□ 0.18
NUP50-218ENST00000493456 MPDZO75970 2070 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 FGF17O60258 216 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 LY6G6DO95868 133 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 HPNP05981 417 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 HIST1H1TP22492 207 aaPredicted RBP16.19■□□□□ 0.18
NUP50-218ENST00000493456 CPN2P22792 545 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 GGT5P36269 586 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 FNTAP49354 379 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 LAPTM5Q13571 262 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 TGFBIQ15582 683 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 MSS51Q4VC12 460 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 TMEM35AQ53FP2 167 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 VASNQ6EMK4 673 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 UBE3DQ7Z6J8 389 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 BBOF1Q8ND07 529 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 NTNG2Q96CW9 530 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 GAL3ST4Q96RP7 486 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 MDFIQ99750 246 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 WDR83Q9BRX9 315 aaKnown RBP16.19■□□□□ 0.18
NUP50-218ENST00000493456 MS4A8Q9BY19 250 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 WWTR1Q9GZV5 400 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 UBQLN3Q9H347 655 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 CALHM2Q9HA72 323 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 MS4A12Q9NXJ0 267 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 WWOXQ9NZC7 414 aa16.19■□□□□ 0.18
NUP50-218ENST00000493456 IQANK1A0A1B0GTG1 560 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 NCF1BA6NI72 391 aaPredicted RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 NCF1CA8MVU1 366 aaPredicted RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 KIAA1324LA8MWY0 1029 aaPredicted RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 CAPN14A8MX76 684 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 CES2O00748 559 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 TP53I11O14683 189 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 ERN1O75460 977 aaKnown RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 TRAPPC6AO75865 159 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 NCF1P14598 390 aaPredicted RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 CDK9P50750 372 aaKnown RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 DOC2AQ14183 400 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 ZNF460Q14592 562 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 POU4F3Q15319 338 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 PPP1R7Q15435 360 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 HIST2H2ACQ16777 129 aaPredicted RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 SPRED3Q2MJR0 410 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 AP5B1Q2VPB7 878 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 Q5PR19 223 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 HIST2H2AA3Q6FI13 130 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 TRMT10BQ6PF06 316 aaKnown RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 SYDE1Q6ZW31 735 aaPredicted RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 P3H2Q8IVL5 708 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 TAGAPQ8N103 731 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 SIMC1Q8NDZ2 872 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 DIO2Q92813 273 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 TANKQ92844 425 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 ISL2Q96A47 359 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 TRIB1Q96RU8 372 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 PIP5K1AQ99755 562 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 PELOQ9BRX2 385 aaKnown RBP16.18■□□□□ 0.18
NUP50-218ENST00000493456 TMEM79Q9BSE2 394 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 PLAC1Q9HBJ0 212 aa16.18■□□□□ 0.18
NUP50-218ENST00000493456 FAM95CA0A1B0GW59 222 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 SH3D21A4FU49 640 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 OR6C76A6NM76 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms