RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ARL8AQ96BM9 186 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 RBM18Q96H35 190 aaKnown RBP11.93□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF354BQ96LW1 612 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 OR8D2Q9GZM6 311 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 TUBB1Q9H4B7 451 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 LRTM1Q9HBL6 345 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 SIRT5Q9NXA8 310 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 ABI3Q9P2A4 366 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 ZDHHC2Q9UIJ5 367 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 PPIEQ9UNP9 301 aaKnown RBP11.93□□□□□ -0.5
CLIP2-209ENST00000493166 DLGAP4Q9Y2H0 992 aa11.93□□□□□ -0.5
CLIP2-209ENST00000493166 PIP5K1BO14986 540 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SUV39H1O43463 412 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 ITM2AO43736 263 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SEC22BO75396 215 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SKAP2O75563 359 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SNUPNO95149 360 aaKnown RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 IL3P08700 152 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 PRPH2P23942 346 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 CASRP41180 1078 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 GSTM5P46439 218 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SLC1A6P48664 564 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 WDR4P57081 412 aaKnown RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF763Q0D2J5 394 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 STX3Q13277 289 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 HEPACAMQ14CZ8 416 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 MEP1AQ16819 746 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 UGT3A2Q3SY77 523 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 ACER2Q5QJU3 275 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SLC6A19Q695T7 634 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 NOXRED1Q6NXP6 359 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SLC48A1Q6P1K1 146 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 ATG14Q6ZNE5 492 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 MMP21Q8N119 569 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 OR1N1Q8NGS0 311 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 FAM76AQ8TAV0 307 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 SLC2A12Q8TD20 617 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 C16orf78Q8WTQ4 265 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 PNPLA2Q96AD5 504 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 PPWD1Q96BP3 646 aaKnown RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 KLHL29Q96CT2 875 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 C11orf24Q96F05 449 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 METTL2AQ96IZ6 378 aaKnown RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 ATP6V1G3Q96LB4 118 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 DEFB126Q9BYW3 111 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 ILKAPQ9H0C8 392 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 C1orf109Q9NX04 203 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 PLA2G3Q9NZ20 509 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 STMN3Q9NZ72 180 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 LUZP4Q9P127 313 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 COPS7AQ9UBW8 275 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 B3GNT3Q9Y2A9 372 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 CCL27Q9Y4X3 112 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 POLR3HQ9Y535 204 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-209ENST00000493166 CSAG2Q9Y5P2 127 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 EML6Q6ZMW3 1958 aa11.92□□□□□ -0.5
CLIP2-209ENST00000493166 EXPH5Q8NEV8 1989 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 NPIPB8E9PQR5 432 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 SLC28A2O43868 658 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ERAL1O75616 437 aaKnown RBP11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ZFAND5O76080 213 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 DDAH2O95865 285 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 F10P00742 488 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 SLC35E2P0CK97 266 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 DRD2P14416 443 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 GPR143P51810 404 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 XKP51811 444 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 RPL38P63173 70 aaKnown RBP11.91□□□□□ -0.5
CLIP2-209ENST00000493166 GALNTL6Q49A17 601 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 TTMPQ5BVD1 217 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 C6orf163Q5TEZ5 329 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 DGAT2L6Q6ZPD8 337 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 Q6ZSR9 355 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF605Q86T29 641 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
CLIP2-209ENST00000493166 LGI4Q8N135 537 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 BEST3Q8N1M1 668 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF781Q8N8C0 355 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 OR2T11Q8NH01 316 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 THAP3Q8WTV1 239 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-209ENST00000493166 RIT1Q92963 219 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ART5Q96L15 291 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 NPAS2Q99743 824 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 SH3GL2Q99962 352 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 CNPPD1Q9BV87 410 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 CDCP1Q9H5V8 836 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF395Q9H8N7 513 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-209ENST00000493166 SLAMF7Q9NQ25 335 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 PFDN4Q9NQP4 134 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF223Q9UK11 482 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-209ENST00000493166 UTS2RQ9UKP6 389 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
CLIP2-209ENST00000493166 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 A0A1W2PS29 197 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 HMGB1P1B2RPK0 211 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-209ENST00000493166 FCHO1O14526 889 aa11.9□□□□□ -0.5
CLIP2-209ENST00000493166 LSM1O15116 133 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms