RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PEX11AO75192 247 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 ERAL1O75616 437 aaKnown RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 ATP6AP2O75787 350 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 SLC35E2P0CK97 266 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 ZNF763Q0D2J5 394 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 KLRB1Q12918 225 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 MFAP5Q13361 173 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 KIAA0040Q15053 153 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 PDCD2Q16342 344 aaPredicted RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 FCRLBQ6BAA4 426 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 SLC48A1Q6P1K1 146 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 ST13P4Q8IZP2 240 aaPredicted RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 SLC5A8Q8N695 610 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 RAB3IL1Q8TBN0 382 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 ELP5Q8TE02 316 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 DYDC1Q8WWB3 177 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 RIT1Q92963 219 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 NCLNQ969V3 563 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 KLHL29Q96CT2 875 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 C19orf60Q96EN9 201 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 VMP1Q96GC9 406 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 ZNF354BQ96LW1 612 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 SORT1Q99523 831 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 DEFB126Q9BYW3 111 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 HEY2Q9UBP5 337 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 UTS2RQ9UKP6 389 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 CES1P1Q9UKY3 287 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 WBP11Q9Y2W2 641 aaKnown RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 HEMK1Q9Y5R4 338 aaPredicted RBP13.04□□□□□ -0.32
CCM2-217ENST00000492883 ZNF780BQ9Y6R6 833 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 LAMA5O15230 3695 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 TRBV11-1A0A0K0K1C0 115 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 DYTNA2CJ06 578 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 PORP16435 677 aaPredicted RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 CSNK2A2P19784 350 aaPredicted RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 FEN1P39748 380 aaKnown RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 PPP2R2AP63151 447 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 MEP1AQ16819 746 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 C6orf163Q5TEZ5 329 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 H3F3CQ6NXT2 135 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 IGFL3Q6UXB1 125 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 APCDD1LQ8NCL9 501 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 OR1N1Q8NGS0 311 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 SLC2A12Q8TD20 617 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 DOK4Q8TEW6 326 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 ZNF75CPQ92670 426 aaPredicted RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 TUBGCP3Q96CW5 907 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 ART5Q96L15 291 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 PPP1R36Q96LQ0 422 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 C3orf30Q96M34 536 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 CDCP1Q9H5V8 836 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 ABI3Q9P2A4 366 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 COPS7AQ9UBW8 275 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 PPIEQ9UNP9 301 aaKnown RBP13.03□□□□□ -0.32
CCM2-217ENST00000492883 TMED5Q9Y3A6 229 aa13.03□□□□□ -0.32
CCM2-217ENST00000492883 ZZEF1O43149 2961 aa13.02□□□□□ -0.32
CCM2-217ENST00000492883 A0A1W2PS29 197 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 B8ZZF3 427 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 ZFAND5O76080 213 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 CPMP14384 443 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 DDCP20711 480 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 NT5EP21589 574 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 MAPK1P28482 360 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 GALNSP34059 522 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 SOX11P35716 441 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 GPR143P51810 404 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 ARG2P78540 354 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 C19orf57Q0VDD7 668 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 ZNF267Q14586 743 aaPredicted RBP13.02□□□□□ -0.33
CCM2-217ENST00000492883 ZNF750Q32MQ0 723 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 NADK2Q4G0N4 442 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 XKR7Q5GH72 579 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 COLEC12Q5KU26 742 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 ACER2Q5QJU3 275 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 FAM71E1Q6IPT2 247 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 FAM180BQ6P0A1 224 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 IGFL2Q6UWQ7 119 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 DGAT2L6Q6ZPD8 337 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 RBMXL3Q8N7X1 1067 aaKnown RBP13.02□□□□□ -0.33
CCM2-217ENST00000492883 FNDC5Q8NAU1 212 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 THAP3Q8WTV1 239 aaPredicted RBP13.02□□□□□ -0.33
CCM2-217ENST00000492883 EXOSC8Q96B26 276 aaKnown RBP13.02□□□□□ -0.33
CCM2-217ENST00000492883 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 MYNNQ9NPC7 610 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 GIMAP4Q9NUV9 329 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.33
CCM2-217ENST00000492883 PLA2G3Q9NZ20 509 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 GIMAP2Q9UG22 337 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 HAO1Q9UJM8 370 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms