RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PIH1D1	Q9NWS0	290 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CISD1	Q9NZ45	108 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	SPATA7	Q9P0W8	599 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	CLCF1	Q9UBD9	225 aa		4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	PPIE	Q9UNP9	301 aa	Known RBP	4.85	□□□□□ -1.63
SEC13-219	ENST00000492602	ESYT3	A0FGR9	886 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	PABPN1L	A6NDY0	278 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	OR51F1	A6NGY5	319 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	CCT8L1P	A6NM43	557 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	IQCF5	A8MTL0	148 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	BTNL10	A8MVZ5	291 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	PSMD12	O00232	456 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	OR1I1	O60431	355 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	AVIL	O75366	819 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	GPC4	O75487	556 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	LY6H	O94772	140 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ACTL6A	O96019	429 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	B3GALT4	O96024	378 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	APOA4	P06727	396 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	CRH	P06850	196 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	COL6A2	P12110	1019 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	CPN1	P15169	458 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	CHM	P24386	653 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	RBL1	P28749	1068 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	GCK	P35557	465 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	GMPR	P36959	345 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	NR4A2	P43354	598 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	KIR2DL2	P43627	348 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF140	P52738	457 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	RPS15A	P62244	130 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	RNF4	P78317	190 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	PRAME	P78395	509 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	TBL3	Q12788	808 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ASPH	Q12797	758 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	MSLN	Q13421	630 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ITIH4	Q14624	930 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	HERC3	Q15034	1050 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	TMED2	Q15363	201 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	CYP1B1	Q16678	543 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	DEFB134	Q4QY38	66 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	NCMAP	Q5T1S8	102 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	SEL1L2	Q5TEA6	688 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	AGAP6	Q5VW22	663 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	OR2A2	Q6IF42	318 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	RANBP10	Q6VN20	620 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	THSD4	Q6ZMP0	1018 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ASPG	Q86U10	573 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	YRDC	Q86U90	279 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	SVOPL	Q8N434	492 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	RNF10	Q8N5U6	811 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	FAM13C	Q8NE31	585 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	OR5L2	Q8NGL0	311 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	STYX	Q8WUJ0	223 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	KCTD4	Q8WVF5	259 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC13A3	Q8WWT9	602 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ATL1	Q8WXF7	558 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	DNAJC1	Q96KC8	554 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	GNRHR2	Q96P88	292 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	UCN2	Q96RP3	112 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	EBNA1BP2	Q99848	306 aa	Known RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	BAG1	Q99933	345 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	PIMREG	Q9BSJ6	248 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	G6PC3	Q9BUM1	346 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ACTR6	Q9GZN1	396 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	GBA3	Q9H227	469 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ARNT2	Q9HBZ2	717 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	CNIH4	Q9P003	139 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	IKZF3	Q9UKT9	509 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	RNF112	Q9ULX5	631 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	PROCR	Q9UNN8	238 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF148	Q9UQR1	794 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC22A7	Q9Y694	548 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	PCLO	Q9Y6V0	5065 aa		4.84	□□□□□ -1.63
SEC13-219	ENST00000492602	MED12L	Q86YW9	2145 aa		4.84	□□□□□ -1.64
SEC13-219	ENST00000492602	TENM3	Q9P273	2699 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	hCG_1818297	A0A087WSY0	165 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	KCNE1B	A0A087WTH5	132 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	UQCRHL	A0A096LP55	91 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	LRP5L	A4QPB2	252 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF839	A8K0R7	811 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	VWC2L	B2RUY7	222 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	GALR3	O60755	368 aa	Predicted RBP	4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	TRIM3	O75382	744 aa	Predicted RBP	4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	CGA	P01215	116 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	PRB2	P02812	416 aa	Predicted RBP	4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC35G6	P0C7Q6	338 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	CD8B	P10966	210 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF23	P17027	643 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	TPSB2	P20231	275 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	CHRM3	P20309	590 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	MSN	P26038	577 aa	Known RBP	4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	PSMB4	P28070	264 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	CTNNA1	P35221	906 aa	Known RBP	4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	FDFT1	P37268	417 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	MASP1	P48740	699 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	PDLIM4	P50479	330 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	PNLIPRP1	P54315	467 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	C21orf58	P58505	322 aa		4.83	□□□□□ -1.64
SEC13-219	ENST00000492602	SKP1	P63208	163 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms