RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 NTMT1Q9BV86 223 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SORBS1Q9BX66 1292 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TP63Q9H3D4 680 aaPredicted RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SNX15Q9NRS6 342 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 PHF11Q9UIL8 331 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 ERVK-11Q9UQG0 969 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 TNPO3Q9Y5L0 923 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 CHCHD2Q9Y6H1 151 aaPredicted RBP7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 IKBKGQ9Y6K9 419 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 SPACA6W5XKT8 324 aa7.74□□□□□ -1.17
SMARCB1-207ENST00000491967 ANKHD1Q8IWZ3 2542 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 MYOCOSA0A1B0GUC4 107 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ESYT3A0FGR9 886 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ANKRD33BA6NCL7 494 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 LRRC14BA6NHZ5 514 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 WASHC1A8K0Z3 465 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 STX16-NPEPL1H3BU86 382 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SAP18O00422 153 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 AQP7O14520 342 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 OR7A17O14581 309 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 STX16O14662 325 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 BCKDKO14874 412 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 TOXO94900 526 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SEMA3DO95025 777 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC35E2P0CK97 266 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 CCL3P10147 92 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 PCNAP12004 261 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 COL6A2P12110 1019 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 COX7A2P14406 83 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ALOX15P16050 662 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 TNNI3P19429 210 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 POU3F2P20265 443 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 CAPN3P20807 821 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SSR2P43308 183 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 PIK3CGP48736 1102 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC37A1P57057 533 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 RPS13P62277 151 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC7A5Q01650 507 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ID2Q02363 134 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 FUT7Q11130 342 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 GTF2H2Q13888 395 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 TECRLQ5HYJ1 363 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 UBAP2Q5T6F2 1119 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 GTF2H2CQ6P1K8 395 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 GK5Q6ZS86 529 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 GOLGA7Q7Z5G4 137 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 CD163Q86VB7 1156 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 CCDC25Q86WR0 208 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 OR4N5Q8IXE1 308 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 LRRC25Q8N386 305 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 C17orf53Q8N3J3 647 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 FAM109AQ8N4B1 249 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 MMGT1Q8N4V1 131 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 TMEM251Q8N6I4 163 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 TRPC4APQ8TEL6 797 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ASB5Q8WWX0 329 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 EXT2Q93063 718 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 PPWD1Q96BP3 646 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SDCCAG3Q96C92 435 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 REPS1Q96D71 796 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ART5Q96L15 291 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 MTERF1Q99551 399 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 PELOQ9BRX2 385 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 C1QTNF3Q9BXJ4 246 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 DEFB127Q9H1M4 99 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 IPPKQ9H8X2 491 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ZBTB26Q9HCK0 441 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ACKR4Q9NPB9 350 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SEMA4BQ9NPR2 832 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 NPDC1Q9NQX5 325 aaPredicted RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 SACM1LQ9NTJ5 587 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 LYARQ9NX58 379 aaKnown RBP7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 NINJ2Q9NZG7 142 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 COPS7AQ9UBW8 275 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 ADAM29Q9UKF5 820 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 TMCO1Q9UM00 188 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 RNF11Q9Y3C5 154 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 PCDHGB3Q9Y5G1 929 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 FAM215AQ9Y5M1 114 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 AKAP6Q13023 2319 aa7.73□□□□□ -1.17
SMARCB1-207ENST00000491967 MPDZO75970 2070 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CELSR1Q9NYQ6 3014 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 MTORP42345 2549 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 OR6C76A6NM76 312 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ACOT7O00154 380 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 HCN1O60741 890 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 PDE9AO76083 593 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SIX3O95343 332 aaPredicted RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CLDN9O95484 217 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TPOP07202 933 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 HOXD4P09016 255 aaPredicted RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 RBP1P09455 135 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SBK3P0C264 359 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 FAM58BPP0C7Q3 252 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ENDOUP21128 410 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 S1PR1P21453 382 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ACVR2AP27037 513 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TYK2P29597 1187 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ECHS1P30084 290 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms