RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 PLEKHM3Q6ZWE6 761 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 OR10G3Q8NGC4 313 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 OR56A3Q8NH54 315 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 GABPB2Q8TAK5 448 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-222ENST00000491867 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 SLC44A1Q8WWI5 657 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 MS4A14Q96JA4 679 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 CSF3RQ99062 836 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 NPLQ9BXD5 320 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-222ENST00000491867 ARL15Q9NXU5 204 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 CNIH4Q9P003 139 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 WIF1Q9Y5W5 379 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 CHCHD2Q9Y6H1 151 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-222ENST00000491867 TENM1Q9UKZ4 2725 aa12.65□□□□□ -0.38
ATG4B-222ENST00000491867 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 RAI1Q7Z5J4 1906 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CR1P17927 2039 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CYR61O00622 381 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CTNSO60931 367 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 ETHE1O95571 254 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 HIST1H2AGP0C0S8 130 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 HIST1H2ADP20671 130 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CRYGSP22914 178 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 GABRB3P28472 473 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 SOX18P35713 384 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CDK9P50750 372 aaKnown RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 AP1S2P56377 157 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 STX4Q12846 297 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 RCAN2Q14206 197 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 WIPI1Q5MNZ9 446 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 RBM20Q5T481 1227 aaKnown RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 DUPD1Q68J44 220 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CNTN4Q8IWV2 1026 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 SLC5A11Q8WWX8 675 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 IGFBPL1Q8WX77 278 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 INTS12Q96CB8 462 aaKnown RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 HIST1H2AHQ96KK5 128 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 HIST1H2AJQ99878 128 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 H2AFJQ9BTM1 129 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 MED18Q9BUE0 208 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 UGT2B28Q9BY64 529 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 ZNF701Q9NV72 531 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
ATG4B-222ENST00000491867 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
ATG4B-222ENST00000491867 SYNDIG1LA6NDD5 238 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 PABPN1LA6NDY0 278 aaKnown RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 A8MXE2 369 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 ERI3O43414 337 aaKnown RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 B3GALT2O43825 422 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 CD5LO43866 347 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 TRIM3O75382 744 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 CYP4B1P13584 511 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 DIO3P55073 304 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 STXBP1P61764 594 aaKnown RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 VEZF1Q14119 521 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 EIPR1Q53HC9 387 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 PLXDC2Q6UX71 529 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 GCNT2Q8N0V5 402 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 NUBPLQ8TB37 319 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 GAL3ST3Q96A11 431 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 PBKQ96KB5 322 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 NAP1L3Q99457 506 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-222ENST00000491867 AIF1LQ9BQI0 150 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 PIGMQ9H3S5 423 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
ATG4B-222ENST00000491867 PKD1L1Q8TDX9 2849 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 PGRMC1O00264 195 aaKnown RBP12.62□□□□□ -0.39
ATG4B-222ENST00000491867 RCBTB2O95199 551 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 TTC4O95801 387 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 AHSGP02765 367 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 HPNP05981 417 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 LOXP28300 417 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-222ENST00000491867 HNRNPH1P31943 449 aaKnown RBP12.62□□□□□ -0.39
ATG4B-222ENST00000491867 IL2P60568 153 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 ID2Q02363 134 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 EFTUD2Q15029 972 aaKnown RBP eCLIP12.62□□□□□ -0.391e-7■■■■□ 21.6
ATG4B-222ENST00000491867 TOMM20Q15388 145 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 CLEC12BQ2HXU8 276 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 NHSL2Q5HYW2 709 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 GALNT7Q86SF2 657 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 KLHDC8AQ8IYD2 350 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 SLC15A4Q8N697 577 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 GRK7Q8WTQ7 553 aa12.62□□□□□ -0.39
ATG4B-222ENST00000491867 ATL1Q8WXF7 558 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms