RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 MRPS30Q9NP92 439 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 TMEM45AQ9NWC5 275 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ERGIC3Q9Y282 383 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 OR2A25A4D2G3 310 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 SYCE1LA8MT33 242 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 SUPT3HB4E1H0 165 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 E7EQ34 232 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CPNE3O75131 537 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 SERPINB7O75635 380 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 SULT1C4O75897 302 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 OR2B3O76000 313 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 FKBP9O95302 570 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 EEF1DP29692 281 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CMPK1P30085 196 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 GCGRP47871 477 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 POLR2JP52435 117 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 UCNP55089 124 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 EPS8Q12929 822 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 NAE1Q13564 534 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 TSNQ15631 228 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 C18orf21Q32NC0 220 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 PAGE3Q5JUK9 113 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF385CQ66K41 422 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF425Q6IV72 752 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF517Q6ZMY9 492 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 PAQR7Q86WK9 346 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF655Q8N720 491 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 KIAA1191Q96A73 305 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 PYCR2Q96C36 320 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 SDCCAG3Q96C92 435 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 CLIP3Q96DZ5 547 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 BRINP2Q9C0B6 783 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 NANOGQ9H9S0 305 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 INTS7Q9NVH2 962 aaKnown RBP8.91□□□□□ -0.98
BRCA1-219ENST00000491747 RIC8BQ9NVN3 520 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ARL15Q9NXU5 204 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 ITGB1BP2Q9UKP3 347 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 PADI1Q9ULC6 663 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 RNF112Q9ULX5 631 aa8.91□□□□□ -0.98
BRCA1-219ENST00000491747 LRRC14BA6NHZ5 514 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 GMNNO75496 209 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 MED26O95402 600 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 MLYCDO95822 493 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 MT-ND1P03886 318 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 CAPN1P07384 714 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 THRBP10828 461 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 TCN2P20062 427 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 GSTM2P28161 218 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 ELK4P28324 431 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 DLSTP36957 453 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 EMX2Q04743 252 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 DAG1Q14118 895 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 PTCHD3Q3KNS1 767 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 FAM98BQ52LJ0 330 aaKnown RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 TTC23Q5W5X9 447 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 GLYATQ6IB77 296 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 TMEM214Q6NUQ4 689 aaKnown RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 GALNT18Q6P9A2 607 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 NCCRP1Q6ZVX7 275 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 FRA10AC1Q70Z53 315 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 RNF44Q7L0R7 432 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 GPR155Q7Z3F1 870 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 THAP5Q7Z6K1 395 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 C8orf59Q8N0T1 100 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 DTWD1Q8N5C7 304 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 SLC15A4Q8N697 577 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 BPIFB6Q8NFQ5 453 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 OR56A3Q8NH54 315 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 FBXL8Q96CD0 374 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 MED8Q96G25 268 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 AURKBQ96GD4 344 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF285Q96NJ3 590 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 OR4K3Q96R72 315 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 SGPP1Q9BX95 441 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 DERL2Q9GZP9 239 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 ADNPQ9H2P0 1102 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 RAD21L1Q9H4I0 556 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 SEMA4BQ9NPR2 832 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 CCDC177Q9NQR7 707 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 ZIM2Q9NZV7 527 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 DHCR7Q9UBM7 475 aaKnown RBP8.9□□□□□ -0.98
BRCA1-219ENST00000491747 PCDHGA11Q9Y5H2 935 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 V9GYQ6 96 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 ATMQ13315 3056 aa8.9□□□□□ -0.98
BRCA1-219ENST00000491747 PCSK5Q92824 1860 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 FAM234BA2RU67 622 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 ASPDHA6ND91 283 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 H7BY64 318 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 J3QRK9 145 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 MEN1O00255 615 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 KPNA4O00629 521 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 NKX2-8O15522 239 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 HPRP00739 348 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 ALPLP05186 524 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 HIST1H2AGP0C0S8 130 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-219ENST00000491747 CCNYL3P0C7X3 344 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 RAP2AP10114 183 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 UROSP10746 265 aa8.9□□□□□ -0.99
BRCA1-219ENST00000491747 NPPBP16860 134 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms