RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SCN8AQ9UQD0 1980 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 TRBV4-1A0A0J9YWV2 114 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 LINC00862A6NCI5 91 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 C2orf78A6NCI8 922 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 RNASET2O00584 256 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 GSTM1P09488 218 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 NSG1P42857 185 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 HBA1P69905 142 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 HSPA14Q0VDF9 509 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 ILKQ13418 452 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 GPR33Q49SQ1 333 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 FLYWCH1Q4VC44 716 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 CXorf57Q6NSI4 855 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 CASP12Q6UXS9 341 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF782Q6ZMW2 699 aaPredicted RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC37A3Q8NCC5 494 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 NACC2Q96BF6 587 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF689Q96CS4 500 aaPredicted RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 RC3H2Q9HBD1 1191 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 LTBP2Q14767 1821 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 LOC102723532A0A0G2JNH3 316 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 A0A1B0GVM2 712 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC22A5O76082 557 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 TIMP1P01033 207 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 IFNA14P01570 189 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 ZDHHC11BP0C7U3 371 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 CAV3P56539 151 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 WDR5P61964 334 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 EEF1A2Q05639 463 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 LIPJQ5W064 366 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 C12orf73Q69YU5 71 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 TCEANCQ8N8B7 351 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 OR6K2Q8NGY2 324 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 ASB11Q8WXH4 323 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 P2RY13Q9BPV8 354 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 TMEM38AQ9H6F2 299 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 C1GALT1Q9NS00 363 aa18.41■□□□□ 0.54
SNAPC3-206ENST00000490969 MGAT4DA6NG13 374 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 PLOD3O60568 738 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ETHE1O95571 254 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 RECKO95980 971 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 IFNW1P05000 195 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 IRS1P35568 1242 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 SPAM1P38567 509 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 GSTM5P46439 218 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 RPS25P62851 125 aaKnown RBP18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 TAGLNQ01995 201 aaKnown RBP18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF33BQ06732 778 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF385BQ569K4 471 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 XKR6Q5GH73 641 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ATAT1Q5SQI0 421 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ANKS3Q6ZW76 656 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 OR4K1Q8NGD4 311 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 OR8J1Q8NGP2 316 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 MTERF3Q96E29 417 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 C1GALT1C1Q96EU7 318 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 TMEM43Q9BTV4 400 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ACSL6Q9UKU0 697 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 RAB23Q9ULC3 237 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 HEPACAM2A8MVW5 462 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 H3BN98 237 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 RFPL3O75679 317 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ETV5P41161 510 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ETV1P50549 477 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 PER3P56645 1201 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 PFN3P60673 137 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 HEPACAMQ14CZ8 416 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ANGPT1Q15389 498 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 PLK5Q496M5 336 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 FAAH2Q6GMR7 532 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 CEACAM20Q6UY09 585 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 CHST9Q7L1S5 443 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 LAPTM4BQ86VI4 370 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 IL17RCQ8NAC3 791 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 PKP4Q99569 1192 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 KCND3Q9UK17 655 aa18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ELF5Q9UKW6 265 aaPredicted RBP18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 DIMT1Q9UNQ2 313 aaKnown RBP18.4■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF106Q9H2Y7 1883 aaKnown RBP18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 A8MX80 341 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 INMT-MINDY4F8WBC2 141 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 FFAR1O14842 300 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 HPGDSO60760 199 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 POU6F2P78424 691 aaPredicted RBP18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 IL18Q14116 193 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 SF3A2Q15428 464 aaKnown RBP18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 TJAP1Q5JTD0 557 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 PXDC1Q5TGL8 231 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 ANKRD54Q6NXT1 300 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 HUS1BQ8NHY5 278 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 TMEM163Q8TC26 289 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 GPR137Q96N19 417 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 KLHL42Q9P2K6 505 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 HCN2Q9UL51 889 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 MAP4K5Q9Y4K4 846 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 AUP1Q9Y679 476 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 BTN3A3O00478 584 aa18.39■□□□□ 0.53
SNAPC3-206ENST00000490969 LRRTM2O43300 516 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms